Vibrio parahaemolyticus 20140723005 |
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Putative Vibrio parahaemolyticus 20140723005 RM systems
Ref: Fu,S. et al. mSystems 5 (2), e00799-19 (2020)
REBASE ref # 36190
| Sequence length: | GenBank #: | |
| chromosome I: | 3,354,580 bp | CP047990 |
| chromosome II: | 1,866,453 bp | CP047991 |
| plasmid pVP128-2: | 67,190 bp | CP047993 |
REBASE acronym: Vpa23005
Org_num: 65108
All begin GSR97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1915 | 331 aa hypothetical protein | |||
| 1920 | S | S.VpaTJ187ORF1820P (100% identity) | S.Vpa23005ORF1925P | |
| 1925 | M | M.VpaTJ187ORF1820P (100% identity) | M.Vpa23005ORF1925P | |
| 1930 | 132 aa hypothetical protein | |||
| 1935 | 36 aa hypothetical protein | |||
| 1940 | elongation factor Ts | |||
| 1945 | 93 aa hypothetical protein | |||
| 1950 | site-specific DNA-methyltransferase | |||
| 1955 | R | VpaTJ187ORF1820P (100% identity) | Vpa23005ORF1925P | |
| 1960 | 61 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1945 | 93 aa hypothetical protein | |||
| 1950 | M | M.VpaTJ187ORF1840P (100% identity) | M.Vpa23005ORF1950P | |
| 1955 | DEAD/DEAH box helicase family protein | |||
| 11050 | DUF3696 domain-containing protein | |||
| 11055 | R | VpaTJ187ORF10495P (100% identity) | Vpa23005ORF11060P | |
| 11060 | M | M.VpaTJ187ORF10495P (100% identity) | M.Vpa23005ORF11060P | |
| 11065 | tyrosine-type recombinase/integrase | |||
| 14450 | ribulose-phosphate 3-epimerase | |||
| 14455 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa23005DamP |
| 14460 | AAA family ATPase | |||
| chromosome II | ||||
| 17080 | 84 aa hypothetical protein | |||
| 17085 | M | M.VpaTJ187ORF16250P (100% identity) | M.Vpa23005ORF17085P | |
| 17090 | 790 aa hypothetical protein | |||
| 24260 | 89 aa hypothetical protein | |||
| 24265 | M | M.VpaTJ187ORF22990P (100% identity) | M.Vpa23005ORF24265P | |
| 24270 | 759 aa hypothetical protein | |||
| 25510 | 90 aa hypothetical protein | |||
| 25515 | M | M.VpaTJ187ORF24185P (100% identity) | M.Vpa23005ORF25515P | |
| 25520 | 759 aa hypothetical protein | |||
| plasmid pVP128-2 | ||||
| 26150 | 366 aa hypothetical protein | |||
| 26155 | M | M.VpaVP17ORF25320P (100% identity) | M.Vpa23005ORF26155P | |
| 26160 | IS5 family transposase | |||