Vibrio parahaemolyticus HZ-52 |
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Putative Vibrio parahaemolyticus HZ-52 RM systems
Ref: Fu,S. et al. mSystems 5 (2), e00799-19 (2020)
REBASE ref # 36190
| Sequence length: | GenBank #: | |
| chromosome I: | 3,471,189 bp | CP047985 |
| chromosome II: | 1,836,399 bp | CP047986 |
| plasmid pHZ52-1: | 67,321 bp | CP047987 |
REBASE acronym: VpaHZ52
Org_num: 65110
All begin GSS61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 755 | AAA family ATPase | |||
| 760 | M | M.VfiMJORF53P (98% identity) | M.VpaHZ52ORF760P | |
| 765 | S | S.Vpo16217ORFAP (60% identity) | S.VpaHZ52ORF760P | |
| 770 | R | Vpo16217ORFAP (99% identity) | VpaHZ52ORF760P | |
| 775 | thymidylate synthase | |||
| 1435 | DUF45 domain-containing protein | |||
| 1440 | R | VpaLCORF3020P (100% identity) | VpaHZ52ORF1450P | |
| 1445 | S | S.VpaLCORF3020P (100% identity) | S.VpaHZ52ORF1450P | |
| 1450 | M | M.VpaLCORF3020P (100% identity) | M.VpaHZ52ORF1450P | |
| 1455 | 620 aa hypothetical protein | |||
| 11510 | ATP-binding protein | |||
| 11515 | R | VpaLCORF12605P (100% identity) | VpaHZ52ORF11530P | |
| 11520 | DUF4268 domain-containing protein | |||
| 11525 | S | S.VpaLCORF12605P (100% identity) | S.VpaHZ52ORF11530P | |
| 11530 | M | M.VpaLCORF12605P (99% identity) | M.VpaHZ52ORF11530P | |
| 11535 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 5390 | 126 aa hypothetical protein | |||
| 5395 | M | M.Vpa910ORF6830P (100% identity) | M.VpaHZ52ORF5395P | |
| 5400 | YkgJ family cysteine cluster protein | |||
| 13305 | ribulose-phosphate 3-epimerase | |||
| 13310 | M | M.VphVPD14DamP (100% identity) | GATC | M.VpaHZ52DamP |
| 13315 | AAA family ATPase | |||
| chromosome II | ||||
| 22470 | ParB N-terminal domain-containing protein | |||
| 22475 | M | M.Vph601ORFDP (100% identity) | M.VpaHZ52ORF22475P | |
| 22480 | AAA family ATPase | |||
| plasmid pHZ52-1 | ||||
| 26215 | IS5 family transposase | |||
| 26220 | M | M.VpaVP17ORF25320P (100% identity) | M.VpaHZ52ORF26220P | |
| 26225 | 366 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1420 | recombinase family protein | |||
| 1425 | R | VpaLCMcrCP (100% identity) | VpaHZ52McrCP | |
| 1430 | R | VpaLCMcrBP (89% identity) | VpaHZ52McrBP | |
| 1435 | DUF45 domain-containing protein | |||