Escherichia coli eco-241 |
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Putative Escherichia coli eco-241 RM systems
Ref: Zhou,J. unpublished
REBASE ref # 27398
| Sequence length: | GenBank #: | |
| Chromosome: | 5,255,408 bp | CP053662 |
| plasmid unnamed: | 340,412 bp | CP053663 |
REBASE acronym: Ecoo241
Org_num: 64920
All begin HPK14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21610 | adenine/cytosine-specific restriction | |||
| 21615 | R | EcoXH992ORF430P (100% identity) | AACNNNNNNGTGC | Ecoo241ORF21620P |
| 21620 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Ecoo241ORF21620P |
| 21625 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Ecoo241ORF21620P |
| 21630 | endoribonuclease SymE | |||
| plasmid unnamed | ||||
| 27005 | type II toxin-antitoxin system Phd/YefM family | |||
| 27010 | M | M.SflFF34ORF9300P (60% identity) | M.Ecoo241ORF27010P | |
| 27015 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1885 | cell division protein DamX | |||
| 1890 | M | M.Ecos69DamP (100% identity) | GATC | M.Ecoo241DamP |
| 1895 | ribulose-phosphate 3-epimerase | |||
| 2415 | DUF2556 family protein | |||
| 2420 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Ecoo241ORF2420P |
| 2425 | DNA-binding transcriptional regulator Fis | |||
| 10155 | phosphohydrolase | |||
| 10160 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Ecoo241DcmP |
| 10165 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Ecoo241DcmP |
| 10170 | drug/metabolite exporter YedA | |||
| 14410 | NinE family protein | |||
| 14415 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Ecoo241ORF14415P |
| 14420 | recombination protein NinB | |||
| plasmid unnamed | ||||
| 25570 | 143 aa hypothetical protein | |||
| 25575 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Ecoo241ORF25575P |
| 25580 | 100 aa hypothetical protein | |||
| 26660 | IS6-like element IS6100 family transposase | |||
| 26665 | R | YpsR1ORFAP (100% identity) | CCWGG | Ecoo241ORF26670P |
| 26670 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Ecoo241ORF26670P |
| 26675 | IS1 family transposase | |||
| 27065 | 102 aa hypothetical protein | |||
| 27070 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Ecoo241ORF27070P |
| 27075 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21605 | GTPase | |||
| 21610 | R | Ssp28760MrrP (100% identity) | Ecoo241MrrP | |
| 21615 | type I restriction-modification system | |||