Pseudomonas aeruginosa PaLo543 |
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Putative Pseudomonas aeruginosa PaLo543 RM systems
Ref: Lood,C. unpublished
REBASE ref # 31727
Complete sequence: 7,077,739 bp
GenBank #: CP075763
REBASE acronym: PaeLo543
Org_num: 65062
All begin KKY50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13905 | tyrosine-type recombinase/integrase | |||
| 13910 | M | M.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | M.PaeLo543ORF13910P |
| 13915 | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.PaeLo543ORF13910P |
| 13920 | anti-phage defense ZorAB system ZorA | |||
| 13925 | OmpA family protein | |||
| 13930 | 547 aa hypothetical protein | |||
| 13935 | DEAD/DEAH box helicase | |||
| 13940 | AAA family ATPase | |||
| 13945 | McrC family protein | |||
| 13950 | R | PaesAG1ORF2679P (100% identity) | CCCANNNNNNTCG | PaeLo543ORF13910P |
| 13955 | IS3 family transposase | |||
| 31635 | DUF91 domain-containing protein | |||
| 31640 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.PaeLo543ORF31645P |
| 31645 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.PaeLo543ORF31645P |
| 31650 | HNH endonuclease | |||
| 31655 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | PaeLo543ORF31645P |
| 31660 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13860 | IS66 family transposase | |||
| 13865 | M | M.PaesAG1ORF2662P (100% identity) | M.PaeLo543ORF13865P | |
| 13870 | AAA family ATPase | |||
| 26955 | nucleoid-associated protein YejK | |||
| 26960 | M | M.PaesAG1ORF5438P (100% identity) | M.PaeLo543ORF26960P | |
| 26965 | Arc family DNA-binding protein | |||
| 27285 | DsbA family protein | |||
| 27290 | M | M.PaePH21ORF25575P (100% identity) | M.PaeLo543ORF27290P | |
| 27295 | ATP-binding protein | |||
| 28115 | 82 aa hypothetical protein | |||
| 28120 | R | PmeTTORFEP (100% identity) | CTCGAG | PaeLo543ORF28125P |
| 28125 | M | M.PmeTTORFEP (96% identity) | CTCGAG | M.PaeLo543ORF28125P |
| 28130 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13935 | DEAD/DEAH box helicase | |||
| 13940 | R | PaeUKJ55McrBP (100% identity) | PaeLo543McrBP | |
| 13945 | R | Psp2021McrCP (100% identity) | PaeLo543McrCP | |
| 13950 | type I restriction endonuclease subunit R | |||