Klebsiella pneumoniae CPE16 |
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Putative Klebsiella pneumoniae CPE16 RM systems
Ref: Element,S.J. et al. bioRxiv (2023)
REBASE ref # 36151
| Sequence length: | GenBank #: | |
| Chromosome: | 5,293,517 bp | CP115707 |
| plasmid pCPE16_2: | 248,840 bp | CP115708 |
| plasmid pCPE16_3: | 119,165 bp | CP115709 |
REBASE acronym: KpnCPE16
Org_num: 64935
All begin PGD48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1320 | helix-turn-helix domain-containing protein | |||
| 1325 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | KpnCPE16ORF1350P |
| 1330 | histidinol-phosphatase | |||
| 1335 | DNA binding domain-containing protein | |||
| 1340 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S.KpnCPE16ORF1350P |
| 1345 | AAA family ATPase | |||
| 1350 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.KpnCPE16ORF1350P |
| 1355 | 400 aa hypothetical protein | |||
| 22770 | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.KpnCPE16ORF22775P |
| 22775 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.KpnCPE16ORF22775P |
| 22780 | R | Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | KpnCPE16ORF22775P |
| 22785 | integrase arm-type DNA-binding domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1855 | cell division protein DamX | |||
| 1860 | M | M.Kpnst68DamP (100% identity) | GATC | M.KpnCPE16DamP |
| 1865 | ribulose-phosphate 3-epimerase | |||
| 8990 | phosphohydrolase | |||
| 8995 | M | M.Kpnst69DcmP (100% identity) | CCWGG | M.KpnCPE16DcmP |
| 9000 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnCPE16DcmP |
| 9005 | drug/metabolite exporter YedA | |||
| 9270 | 75 aa hypothetical protein | |||
| 9275 | M | M.Kpnst68ORF20290P (100% identity) | GATC | M.KpnCPE16ORF9275P |
| 9280 | YqaJ viral recombinase family protein | |||
| 15880 | replication endonuclease | |||
| 15885 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.KpnCPE16ORF15885P |
| 15890 | 3-5 exoribonuclease | |||
| plasmid pCPE16_2 | ||||
| 26875 | DNA replication protein DnaC | |||
| 26880 | M | M.Kqu645ORF52040P (100% identity) | CCWGG | M.KpnCPE16ORF26880P |
| 26885 | R | Kpnst68ORF27050P (100% identity) | CCWGG | KpnCPE16ORF26880P |
| 26890 | 82 aa hypothetical protein | |||
| 26960 | 252 aa hypothetical protein | |||
| 26965 | M | M.Kqu610ORF26075P (100% identity) | M.KpnCPE16ORF26965P | |
| 26970 | 1126 aa hypothetical protein | |||
| plasmid pCPE16_3 | ||||
| 27320 | 56 aa hypothetical protein | |||
| 27325 | M | M.SmaQC11ORF52800P (100% identity) | M.KpnCPE16ORF27325P | |
| 27330 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22750 | IS3 family transposase | |||
| 22755 | R | Ksp4251MrrP (100% identity) | KpnCPE16MrrP | |
| 22760 | STY4851/ECs_5259 family protein | |||