Sphingobium species AntQ-1 |
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Putative Sphingobium species AntQ-1 RM systems
Ref: Jim,S.N. et al. Environ Sci Technol 57 (1), 139-149 (2023)
REBASE ref # 36182
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,758,784 bp | CP117158 |
| plasmid pl6: | 16,164 bp | CP117165 |
REBASE acronym: SspQ1
Org_num: 65091
All begin sphantq_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 661 | 508 aa hypothetical protein | |||
| ??? | RM | NspRr217ORF1490P (44% identity) | SspQ1ORFBP | |
| 663 | 523 aa hypothetical protein | |||
| 1139 | 374 aa hypothetical protein | |||
| 1140 | M | M.SbiO1ORF35930P (97% identity) | M.SspQ1ORF1140P | |
| 1141 | 33 aa hypothetical protein | |||
| 1737 | 66 aa hypothetical protein | |||
| 1738 | R | SspS1ORF5330P (71% identity) | SspQ1ORF1738P | |
| 1739 | 434 aa hypothetical protein | |||
| 2496 | RNA polymerase-associated protein RapA | |||
| 2497 | M | M.Rle127ORF32110P (53% identity) | M.SspQ1ORF2497P | |
| 2498 | 188 aa hypothetical protein | |||
| 2961 | 158 aa hypothetical protein | |||
| ??? | M | M.Cfr006ORF7010P (45% identity) | M.SspQ1ORFAP | |
| 2963 | 167 aa hypothetical protein | |||
| plasmid pl6 | ||||
| 4809 | 328 aa hypothetical protein | |||
| 4810 | M | M.SspFD7ORF3368P (41% identity) | M.SspQ1ORF4810AP | |
| 4811 | IS1380 family transposase ISSp1 | |||
| ??? | M | M.Ssp039ORF9830P (16% identity) | M.SspQ1ORF4810BP | |
| 4812 | Transposon gamma-delta resolvase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 979 | 269 aa hypothetical protein | |||
| 980 | R | Ssp3065ORF15295P (90% identity) | SspQ1ORF981P | |
| ??? | M | M.CrhBb2ORF105P (36% identity) | M.SspQ1ORF981P | |
| 982 | IS1380 family transposase ISSp1 | |||