Streptococcus dysgalactiae USDA_20B |
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Putative Streptococcus dysgalactiae USDA_20B RM systems
Ref: Shoemaker,C.A. et al. Bull Eur Assoc Fish Pathol 2022 (October), 1-12 (2022)
REBASE ref # 36111
| Sequence length: | GenBank #: | |
| Chromosome: | 2,374,611 bp | CP116872 |
| plasmid unnamed1: | 15,714 bp | CP116873 |
REBASE acronym: Sdy20B
Org_num: 64800
All begin PP188_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3615 | helix-turn-helix transcriptional regulator | |||
| 3620 | R | Sdy611ORF692P (100% identity) | Sdy20BORF3655P | |
| 3625 | TIR domain-containing protein | |||
| 3630 | DUF6430 domain-containing protein | |||
| 3635 | S | S3.Sdy20AORF3645P (100% identity) | S3.Sdy20BORF3655P | |
| 3640 | S | S2.Sdy9715ORF9415P (100% identity) | S2.Sdy20BORF3655P | |
| 3645 | tyrosine-type recombinase/integrase | |||
| 3650 | S | S1.Sdy20AORF3645P (100% identity) | S1.Sdy20BORF3655P | |
| 3655 | M | M2.Sdy9715ORF9415P (100% identity) | M.Sdy20BORF3655P | |
| 3660 | N-6 DNA methylase | |||
| 6755 | ATP-binding protein | |||
| 6760 | R | Sdy20AORF6770P (100% identity) | Sdy20BORF6780P | |
| 6765 | AAA family ATPase | |||
| 6770 | S | S2.Spa70ORF9300P (100% identity) | S2.Sdy20BORF6780P | |
| 6775 | S | S.Sdy20AORF6770P (65% identity) | S1.Sdy20BORF6780P | |
| 6780 | M | M.SthEPSORFAP (100% identity) | M.Sdy20BORF6780P | |
| 6785 | transposase | |||
| plasmid unnamed1 | ||||
| 12030 | RepB family plasmid replication initiator | |||
| 12035 | S | S.Sdy20AORF11995P (70% identity) | S.Sdy20BORF12035P | |
| 12040 | 50 aa hypothetical protein | |||
| 11960 | R | Sdy20AORF11995P (100% identity) | Sdy20BORF12035P | |
| 11965 | IS6-like element IS1216 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3515 | DUF4314 domain-containing protein | |||
| 3520 | M | M.Sdy9715ORF9695P (100% identity) | M.Sdy20BORF3520P | |
| 3525 | DNA methyltransferase | |||
| 3520 | DNA (cytosine-5-)-methyltransferase | |||
| 3525 | M | M.Sdy9715ORF9690P (100% identity) | M.Sdy20BORF3525P | |
| 3530 | HNH endonuclease signature motif containing | |||
| 4235 | 99 aa hypothetical protein | |||
| 4240 | M | M.Sdy444ORF10070P (100% identity) | M.Sdy20BORF4240P | |
| 4245 | single-stranded DNA-binding protein | |||
| 4370 | modification methylase Sau96I | |||
| 4375 | M | M.Sdy444ORF10225P (100% identity) | M.Sdy20BORF4375P | |
| 4380 | 90 aa hypothetical protein | |||