Neisseria gonorrhoeae SE690. |
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Putative Neisseria gonorrhoeae SE690. RM systems
Ref: Golparian,D. unpublished
REBASE ref # 34767
Complete sequence: 2,170,090 bp
GenBank #: CP116342
REBASE acronym: Ngo690
Org_num: 64969
All begin PH604_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3525 | replication-associated recombination protein A | |||
| 3530 | R | NgoCT213ORF3510P (99% identity) | GAGNNNNNTAC | Ngo690ORF3555P |
| 3535 | hydroxyacid dehydrogenase | |||
| 3540 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo690ORF3555P |
| 3545 | 186 aa hypothetical protein | |||
| 3550 | 280 aa hypothetical protein | |||
| 3555 | M | M.Ngo1204ORF3530P (99% identity) | GAGNNNNNTAC | M.Ngo690ORF3555P |
| 3560 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo690ORF35P |
| 40 | site-specific DNA-methyltransferase | |||
| 35 | DpnI domain-containing protein | |||
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.Ngo690ORFAP |
| 45 | 184 aa hypothetical protein | |||
| 1495 | phenylalanine--tRNA ligase subunit alpha | |||
| 1500 | V | V.NgoWSORF391P (100% identity) | V.Ngo690ORF1505P | |
| ??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.Ngo690ORF1505P |
| 1510 | R | NgoTFGB2ORF299P (100% identity) | CCGG | Ngo690ORF1505P |
| 1515 | phenylalanine--tRNA ligase subunit beta | |||
| 1785 | IS1595 family transposase | |||
| 1790 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo690ORF1790P |
| 1795 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.Ngo690ORF1790P |
| 1800 | protein Gly1ORF1 | |||
| 1820 | uroporphyrinogen decarboxylase | |||
| 1825 | H | H.NgoN160ORF1885P (100% identity) | H.Ngo690ORF1835P | |
| 1830 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo690ORF1835P |
| 1835 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo690ORF1835P |
| 1840 | DNA repair protein RadA | |||
| 3415 | 3-isopropylmalate dehydrogenase | |||
| 3420 | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo690ORF3425P |
| 3425 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo690ORF3425P |
| 3430 | 3-isopropylmalate dehydratase small subunit | |||
| 4410 | anthranilate synthase component I | |||
| 4415 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo690ORF4415P |
| 4420 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo690ORF4415P |
| 4425 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5755 | replication initiation factor domain-containing | |||
| 5760 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo690ORF5775P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | Ngo690ORF5775P |
| 5775 | M | M.Ngo5ORF3250BP (100% identity) | M.Ngo690ORF5775BP | |
| 5780 | M | M.NgoD159ORF475AP (100% identity) | M.Ngo690ORF5775AP | |
| 5785 | 48 aa hypothetical protein | |||
| 5970 | excinuclease ABC subunit UvrA | |||
| 5975 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo690ORF5980P |
| 5980 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo690ORF5980P |
| 5985 | 62 aa hypothetical protein | |||
| 9240 | FUSC family protein | |||
| 9245 | R | Ngos1291ORF3515P (99% identity) | GGCC | Ngo690ORF9250P |
| 9250 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo690ORF9250P |
| 9255 | ribosome recycling factor | |||
| 9790 | 93 aa hypothetical protein | |||
| 9795 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo690ORF9800P |
| 9800 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo690ORF9800P |
| 9805 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.Ngo690ORF9800P |
| 9810 | Tex family protein | |||
| 10350 | GTPase ObgE | |||
| 10355 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo690ORF10355P |
| 10360 | R | NgoNG250ORF10820P (100% identity) | RGCGCY | Ngo690ORF10355P |
| 10365 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2765 | peptidylprolyl isomerase | |||
| 2770 | M | M.NgoHL122ORF2795P (100% identity) | M.Ngo690ORF2770P | |
| 2775 | R | Ngos1291ORF8455P (100% identity) | Ngo690ORF2770P | |
| 2780 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3230 | alpha-hydroxy acid oxidase | |||
| 3235 | R | Ngo1204ORF3220P (100% identity) | Ngo690ORF3240P | |
| 3240 | M | M.Ngo1204ORF3220P (81% identity) | M.Ngo690ORF3240P | |
| 3250 | tRNA pseudouridine(55) synthase TruB | |||