Pseudomonas aeruginosa 2880 |
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Putative Pseudomonas aeruginosa 2880 RM systems
Ref: Anbo,M. et al. unpublished
REBASE ref # 36103
Complete sequence: 7,153,626 bp
GenBank #: CP116724
REBASE acronym: Pae2880
Org_num: 64786
All begin PMJ92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1570 | 94 aa hypothetical protein | |||
| 1575 | M | M.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | M.Pae2880ORF1575P |
| 1580 | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.Pae2880ORF1575P |
| 1585 | DNA binding domain-containing protein | |||
| 1590 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | Pae2880ORF1575P |
| 1595 | helix-turn-helix domain-containing protein | |||
| 13195 | tyrosine-type recombinase/integrase | |||
| 13200 | M | M.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | M.Pae2880ORF13200P |
| 13205 | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.Pae2880ORF13200P |
| 13210 | anti-phage ZorAB system protein ZorA | |||
| 13215 | OmpA family protein | |||
| 13220 | EH signature domain-containing protein | |||
| 13225 | DEAD/DEAH box helicase | |||
| 13230 | AAA family ATPase | |||
| 13235 | McrC family protein | |||
| 13240 | R | PaesAG1ORF2679P (100% identity) | CCCANNNNNNTCG | Pae2880ORF13200P |
| 13245 | IS3-like element IS222 family transposase | |||
| 32000 | endonuclease NucS | |||
| 32005 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae2880ORF32010P |
| 32010 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae2880ORF32010P |
| 32015 | HNH endonuclease signature motif containing | |||
| 32020 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae2880ORF32010P |
| 32025 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13150 | IS66 family transposase | |||
| 13155 | M | M.PaesAG1ORF2662P (100% identity) | M.Pae2880ORF13155P | |
| 13160 | AAA family ATPase | |||
| 28450 | 82 aa hypothetical protein | |||
| 28455 | R | PmeTTORFEP (100% identity) | CTCGAG | Pae2880ORF28460P |
| 28460 | M | M.PmeTTORFEP (96% identity) | CTCGAG | M.Pae2880ORF28460P |
| 28465 | recombinase family protein | |||
| 32010 | class I SAM-dependent DNA methyltransferase | |||
| 32015 | R | PaePae36ORFBP (100% identity) | Pae2880ORF32015P | |
| 32020 | DEAD/DEAH box helicase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13225 | DEAD/DEAH box helicase | |||
| 13230 | R | PaeUKJ55McrBP (100% identity) | Pae2880McrBP | |
| 13235 | R | Psp2021McrCP (100% identity) | Pae2880McrCP | |
| 13240 | type I restriction endonuclease subunit R | |||