Companilactobacillus farciminis K68-8 |
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Putative Companilactobacillus farciminis K68-8 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 2,493,998 bp | CP116587 |
| plasmid pK68-8-A: | 25,448 bp | CP116588 |
REBASE acronym: CfaK688
Org_num: 64653
All begin PML84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9255 | 189 aa hypothetical protein | |||
| 9260 | S | S.LlaE01II (61% identity) | S3.CfaK688ORF9280P | |
| 9265 | site-specific integrase | |||
| 9270 | S | S1.LspNFFJ11ORF7650P (35% identity) | S2.CfaK688ORF9280P | |
| 9275 | S | S1.LspNFFJ11ORF7650P (10% identity) | S1.CfaK688ORF9280P | |
| 9280 | M | M.Lfa3681ORF9495P (100% identity) | M.CfaK688ORF9280P | |
| 9285 | R | Lfa3699RORF1090P (97% identity) | CfaK688ORF9280P | |
| 9290 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1020 | DEAD/DEAH box helicase | |||
| 1025 | R | BceVD200ORF6123P (56% identity) | CfaK688ORF1030P | |
| 1030 | M | M.BmeH205ORF15590P (63% identity) | M.CfaK688ORF1030P | |
| 1035 | V | V.LplE2ORF15720P (69% identity) | V.CfaK688ORF1030P | |
| 1040 | SIR2 family protein | |||
| 1860 | 2,3-diphosphoglycerate-dependent | |||
| 1865 | M | M.Cdi80ORFAP (13% identity) | M.CfaK688ORF1865P | |
| 1870 | R | LpaDM001ORF4870P (47% identity) | CfaK688ORF1865P | |
| 1875 | MAE_28990/MAE_18760 family HEPN-like nuclease | |||
| plasmid pK68-8-A | ||||
| 12495 | 23S rRNA methyltransferase attenuation leader | |||
| 12500 | R | Lpe782ORF17165P (98% identity) | GCATC | CfaK688ORF12505P |
| 12505 | M | M1.LplnF1I (98% identity) | GCATC | M1.CfaK688ORF12505P |
| 12510 | M | M2.Lpl148ORFCP (97% identity) | GCATC | M2.CfaK688ORF12505P |
| 12515 | site-specific integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1015 | PLP-dependent aminotransferase family protein | |||
| 1020 | R | Lfa3681ORF1415P (97% identity) | CfaK688ORF1020P | |
| 1025 | MutH/Sau3AI family endonuclease | |||