Xylella fastidiosa subsp. fastidiosa CFBP8073 |
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Putative Xylella fastidiosa subsp. fastidiosa CFBP8073 RM systems
Ref: Velasco-Amo,M.D.P. et al. Phytopathology (2022) In press
REBASE ref # 36083
Complete sequence: 2,669,408 bp
GenBank #: CP109886
REBASE acronym: Xfa8073
Org_num: 64690
All begin OK117_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1205 | M48 family metallopeptidase | |||
| 1210 | R | Xfav25ORF1230P (35% identity) | Xfa8073ORF1230BP | |
| 1215 | R | XfasSLORF1215P (56% identity) | Xfa8073ORF1230AP | |
| 1220 | S | S.XfaS2ORF1265P (64% identity) | S2.Xfa8073ORF1230P | |
| 1225 | S | S.XfaXf32ORFAP (26% identity) | S1.Xfa8073ORF1230P | |
| ??? | M | M.Xfav13ORF1230P (95% identity) | M.Xfa8073ORF1230P | |
| 1250 | 45 aa hypothetical protein | |||
| 11910 | 62 aa hypothetical protein | |||
| 11915 | R | XfaY3CORF10805P (99% identity) | Xfa8073ORF11925P | |
| 11920 | S | S.XfaRiv5ORF10665P (62% identity) | S.Xfa8073ORF11925P | |
| 11925 | M | M.XfasSLORF11075P (99% identity) | M.Xfa8073ORF11925P | |
| 11930 | HNH endonuclease family protein | |||
| 11930 | HNH endonuclease family protein | |||
| 11935 | R | Xfav13ORF11075P (99% identity) | Xfa8073ORF11955P | |
| 11940 | S | S.XfaEM3ORF10585P (27% identity) | S2.Xfa8073ORF11955P | |
| 11945 | S | S.XfaSyVAORF2559P (56% identity) | S1.Xfa8073ORF11955P | |
| 11950 | 87 aa hypothetical protein | |||
| 11955 | M | M.XfaOC8ORF12870P (99% identity) | M.Xfa8073ORF11955P | |
| 11960 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4220 | lysozyme | |||
| 4225 | M | M.Xfav16ORF4580P (98% identity) | M.Xfa8073ORF4225P | |
| 4230 | zinc finger-like domain-containing protein | |||
| 5820 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | GCATGC | M.Xfa8073ORF5825P |
| 5835 | Ax21 family protein | |||
| 7195 | lysozyme | |||
| 7200 | M | M.Xfa8073ORF4225P (98% identity) | M.Xfa8073ORF7200P | |
| 7205 | 71 aa hypothetical protein | |||
| 7270 | low molecular weight phosphotyrosine protein | |||
| 7275 | M | M.Xfav13ORF7170P (99% identity) | M.Xfa8073ORF7275P | |
| 7280 | type II toxin-antitoxin system RelE/ParE family | |||
| 8705 | 206 aa hypothetical protein | |||
| 8710 | M | M.XfaCO33ORF11535P (100% identity) | TTCGAA | M.Xfa8073ORF8710P |
| 8715 | R | Xfav25ORF3130P (100% identity) | TTCGAA | Xfa8073ORF8710P |
| 8720 | 85 aa hypothetical protein | |||
| 9145 | DNA primase | |||
| 9150 | R | Xfav25ORF2910P (99% identity) | Xfa8073ORF9155P | |
| 9155 | M | M.Xfav13ORF8800P (63% identity) | M.Xfa8073ORF9155BP | |
| 9160 | M | M.XfaTORF1649P (30% identity) | M.Xfa8073ORF9155AP | |
| 9165 | tryptophan--tRNA ligase | |||
| 9350 | 65 aa hypothetical protein | |||
| 9355 | M | M.XfaBB01ORFJP (81% identity) | M.Xfa8073ORF9355P | |
| 9360 | 68 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4695 | 3-oxoacyl-ACP synthase III | |||
| 4700 | M | M.XfaCO33ORF2725P (99% identity) | M.Xfa8073ORF4700P | |
| 4705 | 67 aa hypothetical protein | |||
| 4710 | R | Xfav13ORF4440P (99% identity) | Xfa8073ORF4700P | |
| 4715 | alpha/beta fold hydrolase | |||