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Putative Xylella fastidiosa subsp. fastidiosa R2XF4358/18 RM systems
Ref: Velasco-Amo,M.D.P. et al. Phytopathology (2022) In press
REBASE ref # 36083
Complete sequence: 2,556,791 bp
GenBank #: CP109898
REBASE acronym: Xfa5818
Org_num: 64694
All begin OK115_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5505 | 62 aa hypothetical protein | |||
5510 | R | Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | Xfa5818ORF5520P |
5515 | S | S.Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | S.Xfa5818ORF5520P |
5520 | M | M.Xfav13ORF11050P (100% identity) | GATCNNNNNNNTGC | M.Xfa5818ORF5520P |
5525 | HNH endonuclease family protein | |||
5525 | HNH endonuclease family protein | |||
5530 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | Xfa5818ORF5545P |
5535 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa5818ORF5545P |
5540 | 88 aa hypothetical protein | |||
5545 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa5818ORF5545P |
5550 | LysE family translocator | |||
7080 | DUF45 domain-containing protein | |||
??? | R | Xfav13ORF1230P (100% identity) | Xfa5818ORF7100P | |
??? | S | S.XfasSLORF1215P (100% identity) | S.Xfa5818ORF7100P | |
??? | M | M.XfaWM11ORF1245P (100% identity) | M.Xfa5818ORF7100P | |
7120 | 53 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
50 | 50 aa hypothetical protein | |||
??? | M | M.Xfav13ORF5610P (100% identity) | GCATGC | M.Xfa5818ORF55P |
65 | Ax21 family protein | |||
1555 | 60 aa hypothetical protein | |||
1560 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa5818ORF1560P | |
1565 | 71 aa hypothetical protein | |||
1630 | low molecular weight phosphotyrosine protein | |||
1635 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa5818ORF1635P | |
1640 | type II toxin-antitoxin system RelE/ParE family | |||
3040 | 206 aa hypothetical protein | |||
3045 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa5818ORF3045P |
3050 | R | Xfav13ORF8585P (100% identity) | TTCGAA | Xfa5818ORF3045P |
3055 | 69 aa hypothetical protein | |||
3255 | 56 aa hypothetical protein | |||
??? | R | Xfav13ORF8800P (100% identity) | Xfa5818ORF3265P | |
??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa5818ORF3265P | |
3275 | tryptophan--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
10320 | 3-oxoacyl-ACP synthase III | |||
10325 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa5818ORF10325P | |
10330 | R | Xfav13ORF4440P (100% identity) | Xfa5818ORF10325P | |
10335 | alpha/beta fold hydrolase |