Streptococcus dysgalactiae USDA-20A |
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Putative Streptococcus dysgalactiae USDA-20A RM systems
Ref: Shoemaker,C.A. et al. Bull Eur Assoc Fish Pathol 2022 (October), 1-12 (2022)
REBASE ref # 36111
| Sequence length: | GenBank #: | |
| Chromosome: | 2,375,990 bp | CP116461 |
| plasmid unnamed1: | 15,715 bp | CP116462 |
REBASE acronym: Sdy20A
Org_num: 64799
All begin PMN45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3605 | helix-turn-helix transcriptional regulator | |||
| 3610 | R | Sdy611ORF692P (100% identity) | Sdy20AORF3645P | |
| 3615 | TIR domain-containing protein | |||
| 3620 | DUF6430 domain-containing protein | |||
| 3625 | S | S3.Sdy20BORF3655P (100% identity) | S3.Sdy20AORF3645P | |
| 3630 | S | S2.Sdy9715ORF9415P (100% identity) | S2.Sdy20AORF3645P | |
| 3635 | tyrosine-type recombinase/integrase | |||
| 3640 | S | S1.Sdy20BORF3655P (100% identity) | S1.Sdy20AORF3645P | |
| 3645 | M | M2.Sdy9715ORF9415P (100% identity) | M.Sdy20AORF3645P | |
| 3650 | N-6 DNA methylase | |||
| 6750 | DNA binding domain-containing protein | |||
| 6755 | R | Sdy20BORF6780P (100% identity) | Sdy20AORF6770P | |
| 6760 | AAA family ATPase | |||
| 6765 | S | S1.Sdy20BORF6780P (65% identity) | S.Sdy20AORF6770P | |
| 6770 | M | M.SthEPSORFAP (100% identity) | M.Sdy20AORF6770P | |
| 6775 | transposase | |||
| plasmid unnamed1 | ||||
| 11990 | RepB family plasmid replication initiator | |||
| 11995 | S | S.Lcrr92185ORFEP (94% identity) | S.Sdy20AORF11995P | |
| 12000 | R | Sdy20BORF12035P (100% identity) | Sdy20AORF11995P | |
| 12005 | IS6-like element IS1216 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3505 | DUF4314 domain-containing protein | |||
| 3510 | M | M.Sdy9715ORF9695P (100% identity) | M.Sdy20AORF3510P | |
| 3515 | DNA methyltransferase | |||
| 3510 | DNA (cytosine-5-)-methyltransferase | |||
| 3515 | M | M.Sdy9715ORF9690P (100% identity) | M.Sdy20AORF3515P | |
| 3520 | HNH endonuclease signature motif containing | |||
| 4225 | 99 aa hypothetical protein | |||
| 4230 | M | M.Sdy444ORF10070P (100% identity) | M.Sdy20AORF4230P | |
| 4235 | single-stranded DNA-binding protein | |||
| 4360 | modification methylase Sau96I | |||
| 4365 | M | M.Sdy444ORF10225P (100% identity) | M.Sdy20AORF4365P | |
| 4370 | 90 aa hypothetical protein | |||