Xanthomonas perforans GEV1001 |
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Putative Xanthomonas perforans GEV1001 RM systems
Ref: Sharma,A. et al. unpublished
REBASE ref # 36061
| Sequence length: | GenBank #: | |
| Chromosome: | 5,031,893 bp | CP116309 |
| plasmid pGEV1001.1: | 56,147 bp | CP116310 |
REBASE acronym: Xpe1001
Org_num: 64594
All begin PJW03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5045 | 88 aa hypothetical protein | |||
| 5050 | R | Xpe872ORF5810P (100% identity) | Xpe1001ORF5060P | |
| 5055 | Fic family protein | |||
| 5060 | M | M.XpeLH3ORF10890P (100% identity) | M.Xpe1001ORF5060P | |
| 5065 | S | S.Xpe91118ORF6580P (100% identity) | S.Xpe1001ORF5060P | |
| 5070 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2105 | 133 aa hypothetical protein | |||
| 2110 | M | M.Xca3077ORF15160P (93% identity) | M.Xpe1001ORF2110P | |
| 2115 | 95 aa hypothetical protein | |||
| 5540 | 131 aa hypothetical protein | |||
| 5545 | R | Xpe872ORF5320P (100% identity) | TGATCA | Xpe1001ORF5555P |
| 5550 | helix-turn-helix transcriptional regulator | |||
| 5555 | M | M.XpeLH3ORF11400P (100% identity) | TGATCA | M.Xpe1001ORF5555P |
| 5560 | conjugal transfer protein TraD | |||
| plasmid pGEV1001.1 | ||||
| 21725 | right-handed parallel beta-helix | |||
| 21730 | R | Xpe872ORF22170P (100% identity) | CCGCGG | Xpe1001ORF21735P |
| 21735 | M | M.XpeLH3ORF23860P (100% identity) | CCGCGG | M.Xpe1001ORF21735P |
| 21740 | ribbon-helix-helix domain-containing protein | |||