Escherichia coli 7.1994/NIST0056 |
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Putative Escherichia coli 7.1994/NIST0056 RM systems
Ref: Stabryla,L. et al. unpublished
REBASE ref # 36048
| Sequence length: | GenBank #: | |
| Chromosome: | 4,793,125 bp | CP116241 |
| plasmid unnamed1: | 122,629 bp | CP116242 |
| plasmid unnamed4: | 93,185 bp | CP116245 |
REBASE acronym: Eco056
Org_num: 64568
All begin PH192_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12895 | AAA family ATPase | |||
| 12900 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco056ORF12905P |
| 12905 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco056ORF12905P |
| 12910 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco056ORF12905P |
| 12915 | transposase | |||
| plasmid unnamed4 | ||||
| 25125 | 3-phosphatase | |||
| 25130 | R | Eco17C14ORF20570P (100% identity) | Eco056ORF25145P | |
| 25135 | anticodon nuclease | |||
| 25140 | S | S.Eco12C02ORF23545P (100% identity) | S.Eco056ORF25145P | |
| 25145 | M | M.Eco12C02ORF23545P (100% identity) | M.Eco056ORF25145P | |
| 25150 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1045 | phosphohydrolase | |||
| 1050 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco056DcmP |
| 1055 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco056DcmP |
| 1060 | drug/metabolite exporter YedA | |||
| 5445 | LexA family transcriptional regulator | |||
| 5450 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco056ORF5450P |
| 5455 | PerC family transcriptional regulator | |||
| 12090 | HNH endonuclease | |||
| 12095 | R | Ecocs03ORF12835P (100% identity) | Eco056ORF12095P | |
| 12100 | 100 aa hypothetical protein | |||
| 17090 | cell division protein DamX | |||
| 17095 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco056DamP |
| 17100 | ribulose-phosphate 3-epimerase | |||
| plasmid unnamed1 | ||||
| 23325 | 73 aa hypothetical protein | |||
| 23330 | M | M.SspPIBORF23080P (100% identity) | M.Eco056ORF23330P | |
| 23335 | 101 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 25005 | recombination-associated protein RdgC | |||
| 25010 | M | M.EfeD053ORF22855P (100% identity) | M.Eco056ORF25010P | |
| 25015 | 87 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12100 | 100 aa hypothetical protein | |||
| 12105 | R | Ecocs03ORF12815P (100% identity) | GAGCC | Eco056ORF12110P |
| 12110 | M | M.EcoM8ORF4405P (100% identity) | GAGCC | M.Eco056ORF12110P |
| 12115 | SNF2-related protein | |||