Escherichia coli STEC1575 |
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Putative Escherichia coli STEC1575 RM systems
Ref: Yang,X. unpublished
REBASE ref # 28117
| Sequence length: | GenBank #: | |
| Chromosome: | 4,955,913 bp | CP116044 |
| plasmid p_STEC1575_1: | 88,676 bp | CP116045 |
REBASE acronym: Eco1575
Org_num: 64527
All begin PHA55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3480 | endoribonuclease SymE | |||
| 3485 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco1575ORF3490P |
| 3490 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco1575ORF3490P |
| 3495 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco1575ORF3490P |
| 3500 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1915 | PerC family transcriptional regulator | |||
| 1920 | M | M.EcoM718ORFFP (100% identity) | GATC | M.Eco1575ORF1920P |
| 1925 | LexA family transcriptional regulator | |||
| 5470 | 67 aa hypothetical protein | |||
| 5475 | M | M.SflLIN17ORF17405P (100% identity) | M.Eco1575ORF5475P | |
| 5480 | phage holin, lambda family | |||
| 14640 | drug/metabolite exporter YedA | |||
| 14645 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco1575DcmP |
| 14650 | M | M.EcoVCSW8DcmP (100% identity) | CCWGG | M.Eco1575DcmP |
| 14655 | phosphohydrolase | |||
| 20060 | ISL3 family transposase | |||
| 20065 | M | M.EcoSTEC413ORF4250P (100% identity) | ACCTGC | M.Eco1575ORF20065P |
| 20070 | 500 aa hypothetical protein | |||
| 21850 | DNA-binding transcriptional regulator Fis | |||
| 21855 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco1575ORF21855P |
| 21860 | DUF2556 family protein | |||
| 22405 | ribulose-phosphate 3-epimerase | |||
| 22410 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1575DamP |
| 22415 | cell division protein DamX | |||
| plasmid p_STEC1575_1 | ||||
| 24130 | 73 aa hypothetical protein | |||
| 24135 | M | M.EcoWY5172ORF23370P (100% identity) | M.Eco1575ORF24135P | |
| 24140 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3265 | SNF2-related protein | |||
| 3270 | M | M.EcoM8ORF4405P (100% identity) | GAGCC | M.Eco1575ORF3270P |
| 3275 | R | EcoXJ51ORF19525P (100% identity) | GAGCC | Eco1575ORF3270P |
| 3280 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3465 | DUF1127 domain-containing protein | |||
| ??? | R | SflWW1GmrSDP (100% identity) | Eco1575GmrSDP | |
| 3480 | endoribonuclease SymE | |||