Escherichia coli DETEC-P622 |
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Putative Escherichia coli DETEC-P622 RM systems
Ref: Moran,R.A. et al. unpublished
REBASE ref # 36014
| Sequence length: | GenBank #: | |
| Chromosome: | 5,029,720 bp | CP116145 |
| plasmid pDETEC55: | 107,932 bp | CP116146 |
| plasmid pDETEC60: | 82,763 bp | CP116147 |
REBASE acronym: EcoP622
Org_num: 64511
All begin PIB88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16695 | endoribonuclease SymE | |||
| 16700 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoP622ORF16710P |
| 16705 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoP622ORF16710P |
| 16710 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoP622ORF16710P |
| 16715 | restriction endonuclease | |||
| 18515 | ash family protein | |||
| 18520 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoP622ORF18525P |
| 18525 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoP622ORF18525P |
| 18530 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoP622ORF18525P |
| 18535 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pDETEC55 | ||||
| 25280 | IS1-like element IS1A family transposase | |||
| 25285 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoP622ORF25295P |
| 25290 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoP622ORF25295P |
| 25295 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoP622ORF25295P |
| 25300 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3570 | drug/metabolite exporter YedA | |||
| 3575 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoP622DcmP |
| 3580 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoP622DcmP |
| 3585 | phosphohydrolase | |||
| 10500 | DNA-binding transcriptional regulator Fis | |||
| 10505 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoP622ORF10505P |
| 10510 | DUF2556 family protein | |||
| 11100 | ribulose-phosphate 3-epimerase | |||
| 11105 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoP622DamP |
| 11110 | cell division protein DamX | |||
| 16330 | helix-turn-helix domain-containing protein | |||
| 16335 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoP622ORF16335P |
| 16340 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoP622ORF16335P |
| 16345 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoP622ORF16335P |
| 16350 | McrC family protein | |||
| 22335 | 71 aa hypothetical protein | |||
| 22340 | M | M.KpnYN1ORFGP (89% identity) | M.EcoP622ORF22340P | |
| 22345 | helix-turn-helix transcriptional regulator | |||
| 24595 | TrmB family transcriptional regulator | |||
| 24600 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoP622ORF24600P |
| 24615 | DUF3927 family protein | |||
| plasmid pDETEC55 | ||||
| 25220 | 73 aa hypothetical protein | |||
| 25225 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoP622ORF25225P |
| 25230 | 103 aa hypothetical protein | |||
| plasmid pDETEC60 | ||||
| 25540 | 97 aa hypothetical protein | |||
| 25545 | M | M.Xca80ORFEP (100% identity) | M.EcoP622ORF25545P | |
| 25550 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16345 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16350 | R | EcosS9McrCP (100% identity) | EcoP622McrCP | |
| 16355 | R | EcosS3McrBP (100% identity) | EcoP622McrBP | |
| 16360 | glycosyltransferase | |||