Sphingosinicella microcystinivorans DMF-3 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Sphingosinicella microcystinivorans DMF-3 RM systems
Ref: Chi,B. unpublished
REBASE ref # 35973
Complete sequence: 4,528,034 bp
GenBank #: CP116005
REBASE acronym: SmiDMF3
Org_num: 64544
All begin PE061_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6130 | UPF0262 family protein | |||
| 6135 | R | Pab2014ORF5096P (84% identity) | SmiDMF3ORF6155P | |
| 6140 | 288 aa hypothetical protein | |||
| 6145 | 173 aa hypothetical protein | |||
| 6150 | S | S.Bsp021ORF5705P (61% identity) | S.SmiDMF3ORF6155P | |
| 6155 | M | M.Pab2014ORF5096P (83% identity) | M.SmiDMF3ORF6155P | |
| 6160 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5340 | 272 aa hypothetical protein | |||
| 5345 | RM | SspTCM1ORF2530P (69% identity) | SmiDMF3ORF5345P | |
| 5350 | integrase arm-type DNA-binding domain-containing | |||
| 6655 | EamA family transporter | |||
| 6660 | M | M.PcoRK1IV (61% identity) | M.SmiDMF3ORF6660P | |
| 6665 | R | PyeTT13ORF13530P (30% identity) | SmiDMF3ORF6660P | |
| 6670 | IS21 family transposase | |||
| 10130 | 251 aa hypothetical protein | |||
| 10135 | RM | SspHMP6ORF2066P (77% identity) | SmiDMF3ORF10135P | |
| 10140 | 126 aa hypothetical protein | |||
| 10710 | phage terminase small subunit P27 family | |||
| 10715 | M | M.Swi14551ORF19435P (72% identity) | M.SmiDMF3ORF10715P | |
| 10720 | HNH endonuclease signature motif containing | |||
| 10860 | AAA family ATPase | |||
| 10865 | RM | Efl213ORF915P (98% identity) | SmiDMF3ORF10870P | |
| 10870 | M | M2.CnaPQ2ORF1080P (92% identity) | M1.SmiDMF3ORF10870P | |
| 10875 | M | M1.Nsp652ORFHP (97% identity) | M2.SmiDMF3ORF10870P | |
| 10880 | HigA family addiction module antitoxin | |||
| 11565 | ribonuclease HII | |||
| 11570 | M | M.SmiB9ORF36330P (94% identity) | M.SmiDMF3ORF11570P | |
| 11575 | dihydropteroate synthase | |||
| 14040 | DUF2840 domain-containing protein | |||
| ??? | M | M.SspC82ORFIP (64% identity) | M.SmiDMF3ORF14045P | |
| 14065 | replication initiator protein A | |||
| 14090 | 74 aa hypothetical protein | |||
| 14095 | M | M.SspC82ORFJP (91% identity) | M.SmiDMF3ORF14095P | |
| 14100 | ribbon-helix-helix domain-containing protein | |||
| 18735 | SOS response-associated peptidase family | |||
| 18740 | RM | Rsp23085ORF1515P (56% identity) | SmiDMF3ORF18740P | |
| 18745 | XRE family transcriptional regulator | |||
| 19825 | type II toxin-antitoxin system HipA family | |||
| 19830 | R | NolDW067ORF5150P (90% identity) | SmiDMF3ORF19830P | |
| 19835 | relaxase/mobilization nuclease RlxS | |||
| 19835 | relaxase/mobilization nuclease RlxS | |||
| 19840 | M | M.Cst3363ORF26495P (49% identity) | M.SmiDMF3ORF19840P | |
| 19845 | 70 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10595 | DUF4391 domain-containing protein | |||
| 10600 | M | M.Lsp250ORF12680P (61% identity) | M.SmiDMF3ORF10600P | |
| 10605 | R | Sma203NORF14580P (94% identity) | SmiDMF3ORF10600P | |
| 10610 | 64 aa hypothetical protein | |||