Salmonella enterica subsp. enterica serovar Typhimurium S46L1 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium S46L1 RM systems
Ref: Li,C. et al. Foods 11 (23), 3854 (2022)
REBASE ref # 36035
| Sequence length: | GenBank #: | |
| Chromosome: | 5,012,779 bp | CP091540 |
| plasmid pMCR_S46L1: | 149,407 bp | CP091541 |
REBASE acronym: SenS46L1
Org_num: 64540
All begin L5Z03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20465 | restriction endonuclease | |||
| 20470 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS46L1ORF20475P |
| 20475 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS46L1ORF20475P |
| 20480 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS46L1ORF20475P |
| 20485 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.SenS46L1DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS46L1ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 6100 | ead/Ea22-like family protein | |||
| 6105 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenS46L1ORF6105P |
| 6110 | DUF551 domain-containing protein | |||
| 9690 | phosphohydrolase | |||
| 9695 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS46L1DcmP |
| 9700 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS46L1DcmP |
| 9705 | drug/metabolite exporter YedA | |||
| 20625 | BREX system P-loop protein BrxC | |||
| 20630 | RM | StyUK1IV (100% identity) | GATCAG | SenS46L1ORF20630P |
| 20635 | AAA family ATPase | |||
| plasmid pMCR_S46L1 | ||||
| 25115 | 55 aa hypothetical protein | |||
| 25120 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.SenS46L1ORF25120P |
| 25125 | thermonuclease family protein | |||
| 25330 | DNA-binding protein | |||
| 25335 | M | M.YpsF1ORFDP (100% identity) | GATC | M.SenS46L1ORF25335P |
| 25340 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18160 | small effector SsaA | |||
| 18165 | R | StyUK1IP (99% identity) | CAGAG | SenS46L1ORF18170P |
| 18170 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS46L1ORF18170P |
| 18175 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20460 | BrnT family toxin | |||
| 20465 | R | StyUK1MrrP (100% identity) | SenS46L1Mrr2P | |
| 20470 | type I restriction-modification system | |||
| 20650 | protease Lon-related BREX system protein BrxL | |||
| 20655 | R | StyLTMrrP (100% identity) | SenS46L1MrrP | |
| 20660 | AAA domain-containing protein | |||