Salmonella enterica subsp. enterica serovar Typhimurium S58L2 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium S58L2 RM systems
Ref: Li,C. et al. Foods 11 (23), 3854 (2022)
REBASE ref # 36035
| Sequence length: | GenBank #: | |
| Chromosome: | 5,012,649 bp | CP091542 |
| plasmid pMCR_S58L2: | 185,529 bp | CP091543 |
REBASE acronym: SenS58L2
Org_num: 64541
All begin L5Z53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20470 | restriction endonuclease | |||
| 20475 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenS58L2ORF20480P |
| 20480 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenS58L2ORF20480P |
| 20485 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenS58L2ORF20480P |
| 20490 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.SenS58L2DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS58L2ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 6110 | ead/Ea22-like family protein | |||
| 6115 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenS58L2ORF6115P |
| 6120 | DUF551 domain-containing protein | |||
| 9700 | phosphohydrolase | |||
| 9705 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenS58L2DcmP |
| 9710 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS58L2DcmP |
| 9715 | drug/metabolite exporter YedA | |||
| 20630 | BREX system P-loop protein BrxC | |||
| 20635 | RM | StyUK1IV (100% identity) | GATCAG | SenS58L2ORF20635P |
| 20640 | AAA family ATPase | |||
| plasmid pMCR_S58L2 | ||||
| 25120 | 55 aa hypothetical protein | |||
| 25125 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.SenS58L2ORF25125P |
| 25130 | thermonuclease family protein | |||
| 25540 | DNA-binding protein | |||
| 25545 | M | M.YpsF1ORFDP (100% identity) | GATC | M.SenS58L2ORF25545P |
| 25550 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18165 | small effector SsaA | |||
| 18170 | R | StyUK1IP (99% identity) | CAGAG | SenS58L2ORF18175P |
| 18175 | M | M.StyUK1I (100% identity) | CAGAG | M.SenS58L2ORF18175P |
| 18180 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20465 | BrnT family toxin | |||
| 20470 | R | StyUK1MrrP (100% identity) | SenS58L2Mrr2P | |
| 20475 | type I restriction-modification system | |||
| 20655 | protease Lon-related BREX system protein BrxL | |||
| 20660 | R | StyLTMrrP (100% identity) | SenS58L2MrrP | |
| 20665 | AAA domain-containing protein | |||