Salmonella enterica subsp. enterica serovar Thompson MFDS1011657 |
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Putative Salmonella enterica subsp. enterica serovar Thompson MFDS1011657 RM systems
Ref: Lee,W. et al. Sci Rep 12 (1), 20553 (2022)
REBASE ref # 36033
| Sequence length: | GenBank #: | |
| Chromosome: | 4,822,555 bp | CP092627 |
| plasmid pMFDS1011657: | 92,361 bp | CP092628 |
REBASE acronym: Sen11657
Org_num: 64537
All begin MJ899_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19840 | 322 aa hypothetical protein | |||
| 19845 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | Sen11657ORF19850P |
| 19850 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.Sen11657ORF19850P |
| 19855 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.Sen11657ORF19850P |
| 19860 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.StyTDamP (100% identity) | GATC | M.Sen11657DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.SenThORF2290P (100% identity) | ATGCAT | M.Sen11657ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 5555 | DUF3850 domain-containing protein | |||
| 5560 | M | M.SenThORF5560P (100% identity) | M.Sen11657ORF5560P | |
| 5565 | replication endonuclease | |||
| 9460 | phosphohydrolase | |||
| 9465 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen11657DcmP |
| 9470 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen11657DcmP |
| 9475 | drug/metabolite exporter YedA | |||
| 19980 | YebC/PmpR family DNA-binding transcriptional | |||
| 19985 | R | SensS639ORF19755P (100% identity) | Sen11657ORF19985P | |
| 19990 | 239 aa hypothetical protein | |||
| 19990 | 239 aa hypothetical protein | |||
| 19995 | R | Spy5740IVP (100% identity) | GGTACC | Sen11657ORF20000P |
| 20000 | M | M.Spy5740IV (100% identity) | GGTACC | M.Sen11657ORF20000P |
| 20005 | 202 aa hypothetical protein | |||
| plasmid pMFDS1011657 | ||||
| 23620 | glutamine--tRNA ligase | |||
| ??? | M | M.SenThORF23620P (100% identity) | M.Sen11657ORF23625P | |
| 23630 | 216 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17515 | small effector SsaA | |||
| 17520 | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen11657ORF17525P |
| 17525 | M | M.Spy5740II (100% identity) | CAGAG | M.Sen11657ORF17525P |
| 17530 | MFS transporter | |||