Salmonella enterica subsp. enterica serovar Typhimurium R15.0430 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium R15.0430 RM systems
Ref: Chiou,C.-S. et al. unpublished
REBASE ref # 36034
| Sequence length: | GenBank #: | |
| Chromosome: | 4,883,017 bp | CP115834 |
| plasmid pR15.0430_103k: | 103,536 bp | CP115836 |
| plasmid pR15.0430_329k: | 329,489 bp | CP115835 |
REBASE acronym: Sen0430
Org_num: 64539
All begin ETD79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20320 | restriction endonuclease | |||
| 20325 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen0430ORF20330P |
| 20330 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen0430ORF20330P |
| 20335 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen0430ORF20330P |
| 20340 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.Sen0430DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen0430ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 3235 | DUF2732 family protein | |||
| 3240 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen0430ORF3240P |
| 3245 | replication endonuclease | |||
| 5645 | IS6-like element IS26 family transposase | |||
| 5650 | M | M.StyCORF187P (49% identity) | M.Sen0430ORF5650P | |
| 5655 | thermonuclease family protein | |||
| 6245 | ead/Ea22-like family protein | |||
| 6250 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen0430ORF6250P |
| 6255 | DUF551 domain-containing protein | |||
| 9855 | phosphohydrolase | |||
| 9860 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen0430DcmP |
| 9865 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen0430DcmP |
| 9870 | drug/metabolite exporter YedA | |||
| 20480 | BREX system P-loop protein BrxC | |||
| 20485 | RM | StyUK1IV (100% identity) | GATCAG | Sen0430ORF20485P |
| 20490 | AAA family ATPase | |||
| plasmid pR15.0430_103k | ||||
| 25730 | 103 aa hypothetical protein | |||
| 25735 | M | M.StyR64ORFAP (100% identity) | M.Sen0430ORF25735P | |
| 25740 | 73 aa hypothetical protein | |||
| plasmid pR15.0430_329k | ||||
| 24445 | 55 aa hypothetical protein | |||
| 24450 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen0430ORF24450P |
| 24455 | thermonuclease family protein | |||
| 25405 | 106 aa hypothetical protein | |||
| 25410 | M | M.Ssp15303ORFDP (100% identity) | M.Sen0430ORF25410P | |
| 25415 | 202 aa hypothetical protein | |||
| 25535 | DNA-binding protein | |||
| 25540 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.Sen0430ORF25540P |
| 25545 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18015 | small effector SsaA | |||
| 18020 | R | StyUK1IP (99% identity) | CAGAG | Sen0430ORF18025P |
| 18025 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen0430ORF18025P |
| 18030 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20315 | BrnT family toxin | |||
| 20320 | R | StyUK1MrrP (100% identity) | Sen0430Mrr2P | |
| 20325 | type I restriction-modification system | |||
| 20505 | protease Lon-related BREX system protein BrxL | |||
| 20510 | R | StyLTMrrP (100% identity) | Sen0430MrrP | |
| 20515 | AAA domain-containing protein | |||