Neisseria gonorrhoeae MS11 HL-1-22 |
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Putative Neisseria gonorrhoeae MS11 HL-1-22 RM systems
Ref: Ozer,E.A. et al. unpublished
REBASE ref # 36023
Complete sequence: 2,259,189 bp
GenBank #: CP115904
REBASE acronym: NgoHL122
Org_num: 64495
All begin OK782_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2060 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2065 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.NgoHL122ORF2065P |
| 2070 | DNA damage-inducible protein D | |||
| ??? | S | S.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | S.NgoHL122ORF2065P |
| 2085 | R | NgoMS11ORF4820P (100% identity) | GCANNNNNNNGTC | NgoHL122ORF2065P |
| 2090 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3555 | replication-associated recombination protein A | |||
| 3560 | R | NgoMS11ORF6305P (100% identity) | GAGNNNNNTAC | NgoHL122ORF3585P |
| 3565 | hydroxyacid dehydrogenase | |||
| 3570 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoHL122ORF3585P |
| 3575 | 186 aa hypothetical protein | |||
| 3580 | 280 aa hypothetical protein | |||
| ??? | M | M.NgoNG250ORF4770P (100% identity) | GAGNNNNNTAC | M.NgoHL122ORF3585P |
| 3600 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | NgoPID18ORF231P (100% identity) | GATC | NgoHL122ORF40P |
| ??? | M | M.NgoWOORF8P (100% identity) | GATC | M.NgoHL122ORF40P |
| 45 | 184 aa hypothetical protein | |||
| 1825 | IS1595 family transposase | |||
| 1830 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoHL122ORF1830P |
| 1835 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoHL122ORF1830P |
| 1840 | protein Gly1ORF1 | |||
| 1860 | uroporphyrinogen decarboxylase | |||
| 1865 | H | H.NgoN160ORF1885P (100% identity) | H.NgoHL122ORF1875P | |
| 1870 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoHL122ORF1875P |
| 1875 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoHL122ORF1875P |
| 1880 | DNA repair protein RadA | |||
| 3435 | 3-isopropylmalate dehydrogenase | |||
| 3440 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoHL122ORF3445P |
| 3445 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoHL122ORF3445P |
| 3450 | 3-isopropylmalate dehydratase small subunit | |||
| 4785 | anthranilate synthase component I | |||
| 4790 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoHL122ORF4790P |
| 4795 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoHL122ORF4790P |
| 4800 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6290 | replication initiation factor domain-containing | |||
| 6295 | V | V.Ngos1291ORF65P (90% identity) | V.NgoHL122ORF6310P | |
| ??? | R | NgoWSORF1801P (100% identity) | CCGG | NgoHL122ORF6310P |
| ??? | M | M.NgoMS11ORF8845P (100% identity) | CCGG | M.NgoHL122ORF6310P |
| 6320 | 48 aa hypothetical protein | |||
| 6510 | excinuclease ABC subunit UvrA | |||
| 6515 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoHL122ORF6520P |
| 6520 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoHL122ORF6520P |
| 6525 | 62 aa hypothetical protein | |||
| 9810 | FUSC family protein | |||
| ??? | R | NgoMS11ORF580P (100% identity) | GGCC | NgoHL122ORF9825P |
| 9825 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoHL122ORF9825P |
| 9830 | ribosome recycling factor | |||
| 10365 | 93 aa hypothetical protein | |||
| 10370 | R | NgoWSIIIP (100% identity) | GGTGA | NgoHL122ORF10375P |
| 10375 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoHL122ORF10375P |
| 10380 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoHL122ORF10375P |
| 10385 | Tex family protein | |||
| 10925 | GTPase ObgE | |||
| 10930 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoHL122ORF10930P |
| 10935 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoHL122ORF10930P |
| 10940 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2790 | peptidylprolyl isomerase | |||
| 2795 | M | M.NgoH035ORF5680P (100% identity) | M.NgoHL122ORF2795P | |
| 2800 | R | Ngos1291ORF8455P (100% identity) | NgoHL122ORF2795P | |
| 2805 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3255 | alpha-hydroxy acid oxidase | |||
| 3260 | R | NgoWSORF749P (100% identity) | GCAGA | NgoHL122ORF3265P |
| 3265 | M | M.NgoMS11ORF5990P (100% identity) | GCAGA | M.NgoHL122ORF3265P |
| 3270 | tRNA pseudouridine(55) synthase TruB | |||