Citrobacter braakii GW-Imi-1b1 |
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Putative Citrobacter braakii GW-Imi-1b1 RM systems
Ref: Schneider,D. unpublished
REBASE ref # 30128
| Sequence length: | GenBank #: | |
| Chromosome: | 5,092,943 bp | CP115723 |
| plasmid unnamed1: | 140,871 bp | CP115724 |
| plasmid unnamed4: | 24,320 bp | CP115731 |
| plasmid unnamed8: | 5,388 bp | CP115735 |
REBASE acronym: Cbr1b1
Org_num: 64277
All begin PGH06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3205 | IS3-like element ISSpu6 family transposase | |||
| 3210 | S | S.Csp0887ORF21840P (71% identity) | S2.Cbr1b1ORF3220P | |
| 3215 | S | S.Kqu4101ORF22720P (22% identity) | S1.Cbr1b1ORF3220P | |
| 3220 | M | M.Csp0887ORF21840P (100% identity) | M.Cbr1b1ORF3220P | |
| 3225 | R | Csp0887ORF21840P (100% identity) | Cbr1b1ORF3220P | |
| 3230 | IS110-like element IS4321 family transposase | |||
| 12110 | IS4-like element ISApu2 family transposase | |||
| 12115 | S | S.Kqu610ORF5290P (84% identity) | S.Cbr1b1ORF12120P | |
| 12120 | M | M.Kqu5BL06ORF28940P (100% identity) | M.Cbr1b1ORF12120P | |
| 12125 | tyrosine-type recombinase/integrase | |||
| 16300 | 371 aa hypothetical protein | |||
| 16305 | M | M.CyoCF10ORF9780P (100% identity) | M.Cbr1b1ORF16305P | |
| 16310 | S | S.CyoCF10ORF9780P (28% identity) | S1.Cbr1b1ORF16305P | |
| 16315 | IS3-like element ISSpu6 family transposase | |||
| 16320 | IS4-like element ISApu2 family transposase | |||
| 16325 | S | S.CyoCF10ORF9780P (46% identity) | S2.Cbr1b1ORF16305P | |
| 16330 | transposase | |||
| 16335 | IS66 family insertion sequence element accessory | |||
| 16340 | IS3-like element ISSpu6 family transposase | |||
| 16345 | IS66 family transposase | |||
| 16350 | S | S.Ero90065ORF4760P (12% identity) | S3.Cbr1b1ORF16305P | |
| 16355 | YecA family protein | |||
| 16360 | R | CyoCF10ORF9780P (99% identity) | Cbr1b1ORF16305P | |
| 16365 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2000 | HNH endonuclease | |||
| 2005 | R | Csp0887ORF21815P (99% identity) | Cbr1b1ORF2005P | |
| 2010 | HNH endonuclease | |||
| 4265 | 73 aa hypothetical protein | |||
| 4270 | M | M.Eco9067ORF1166P (99% identity) | M.Cbr1b1ORF4270P | |
| 4275 | 127 aa hypothetical protein | |||
| 6925 | cell division protein DamX | |||
| 6930 | M | M.Eco9067DamP (100% identity) | GATC | M.Cbr1b1DamP |
| 6935 | ribulose-phosphate 3-epimerase | |||
| 7480 | DUF2556 family protein | |||
| 7485 | M | M.Csp0887ORF2285P (56% identity) | M.Cbr1b1ORF7485P | |
| 7490 | IS4-like element ISApu2 family transposase | |||
| 8515 | TraR/DksA family transcriptional regulator | |||
| 8520 | M | M.Sen51472ORF18250P (82% identity) | M.Cbr1b1ORF8520P | |
| 8525 | 60 aa hypothetical protein | |||
| 12760 | chromosome partitioning protein ParB | |||
| 12765 | M | M.Csp0887ORF7315P (99% identity) | M.Cbr1b1ORF12765P | |
| 12770 | DUF1317 family protein | |||
| 16000 | phosphohydrolase | |||
| 16005 | M | M.Csp0887ORF10545P (100% identity) | CCWGG | M.Cbr1b1ORF16005P |
| 16010 | V | V.Eco9067ORF2227P (100% identity) | V.Cbr1b1ORF16005P | |
| 16015 | drug/metabolite exporter YedA | |||
| plasmid unnamed1 | ||||
| 24675 | ParB/Srx family N-terminal domain-containing | |||
| 24680 | M | M.Psp73ORFEP (96% identity) | M.Cbr1b1ORF24680P | |
| 24685 | 66 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 25955 | recombinase family protein | |||
| 25960 | M | M.SmaY426ORF27P (100% identity) | CTGCAG | M.Cbr1b1ORF25960P |
| 25965 | R | SmaY426ORF27P (100% identity) | CTGCAG | Cbr1b1ORF25960P |
| 25970 | 82 aa hypothetical protein | |||
| plasmid unnamed8 | ||||
| 26210 | conjugal transfer protein TraD | |||
| 26215 | R | KspBL05ORF40020P (100% identity) | CGATCG | Cbr1b1ORF26220P |
| 26220 | M | M.CfrA41ORFFP (100% identity) | CGATCG | M.Cbr1b1ORF26220P |
| 26225 | 178 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | type I restriction endonuclease subunit R | |||
| 1865 | R | Csp229GmrDP (99% identity) | Cbr1b1GmrSDP | |
| 1870 | DUF1127 domain-containing protein | |||