Salmonella enterica subsp. enterica serovar Bispebjerg 20SAL-1342-3 |
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Putative Salmonella enterica subsp. enterica serovar Bispebjerg 20SAL-1342-3 RM systems
Ref: Tiengo,A. et al. unpublished
REBASE ref # 35991
Complete sequence: 5,023,030 bp
GenBank #: CP115551
REBASE acronym: Sen13423
Org_num: 64383
All begin PEE20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21480 | NERD domain-containing protein | |||
| 21485 | S | S.Sens29927ORF20150P (100% identity) | S2.Sen13423ORF21505P | |
| 21490 | N-6 DNA methylase | |||
| 21495 | 44 aa hypothetical protein | |||
| 21500 | restriction endonuclease | |||
| 21505 | M | M.Sens29927ORF20165P (100% identity) | M.Sen13423ORF21505P | |
| 21510 | S | S2.SenS50ORF19940P (100% identity) | CCGANNNNNGTC | S1.Sen13423ORF21505P |
| 21515 | R | Sens29927ORF20165P (100% identity) | Sen13423ORF21505P | |
| 21520 | endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.Sen13423DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen13423ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 3200 | DUF2732 family protein | |||
| 3205 | M | M.Sen224ORF3155P (97% identity) | M.Sen13423ORF3205P | |
| 3210 | phosphoadenosine phosphosulfate reductase family | |||
| 7835 | DUF550 domain-containing protein | |||
| 7840 | M | M.SenYU39ORF2843P (98% identity) | M.Sen13423ORF7840P | |
| 7845 | 192 aa hypothetical protein | |||
| 7905 | PerC family transcriptional regulator | |||
| 7910 | M | M.SenST224ORF7170P (100% identity) | GATC | M.Sen13423ORF7910P |
| 7915 | RusA family crossover junction | |||
| 9305 | phosphohydrolase | |||
| 9310 | M | M.SenLiv11DcmP (100% identity) | CCWGG | M.Sen13423DcmP |
| 9315 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen13423DcmP |
| 9320 | drug/metabolite exporter YedA | |||
| 13780 | phage holin family protein | |||
| 13785 | M | M.Cro51459ORF23220P (90% identity) | M.Sen13423ORF13785P | |
| 13790 | 108 aa hypothetical protein | |||
| 13820 | RusA family crossover junction | |||
| 13825 | M | M.SenST224ORF7170P (99% identity) | M.Sen13423ORF13825P | |
| 13830 | PerC family transcriptional regulator | |||
| 15185 | methyltransferase | |||
| 15190 | M | M.SenS051ORF14720P (100% identity) | M.Sen13423ORF15190P | |
| 15195 | 82 aa hypothetical protein | |||
| 21745 | malate transporter | |||
| 21750 | M | M.SspZ69DndBP (99% identity) | M.Sen13423DndBP | |
| 21755 | DNA phosphorothioation system sulfurtransferase | |||
| 21750 | DNA sulfur modification protein DndB | |||
| 21755 | M | M.SspZ69DndCP (100% identity) | M.Sen13423DndCP | |
| 21760 | DNA sulfur modification protein DndD | |||
| 21755 | DNA phosphorothioation system sulfurtransferase | |||
| 21760 | M | M.SenK0023DndDP (97% identity) | M.Sen13423DndDP | |
| 21765 | DNA sulfur modification protein DndE | |||
| 21760 | DNA sulfur modification protein DndD | |||
| 21765 | M | M.Cbr4C01DndEP (95% identity) | M.Sen13423DndEP | |
| 21770 | 318 aa hypothetical protein | |||
| 21775 | 367 aa hypothetical protein | |||
| 21780 | R | Sen43041DptHP (99% identity) | Sen13423DptHP | |
| 21785 | DNA phosphorothioation-dependent restriction | |||
| 21780 | DNA phosphorothioation-dependent restriction | |||
| 21785 | R | SspZ69DptGP (100% identity) | Sen13423DptGP | |
| 21790 | DNA phosphorothioation-dependent restriction | |||
| 21785 | DNA phosphorothioation-dependent restriction | |||
| 21790 | R | SenFC745DptFP (100% identity) | Sen13423DptFP | |
| 21795 | integrase arm-type DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19300 | small effector SsaA | |||
| 19305 | R | Sens29927ORF17960P (100% identity) | CAGAG | Sen13423ORF19310P |
| 19310 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.Sen13423ORF19310P |
| 19315 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21495 | 44 aa hypothetical protein | |||
| 21500 | R | Sens29927MrrP (100% identity) | Sen13423MrrP | |
| 21505 | class I SAM-dependent DNA methyltransferase | |||