Sphingobium yanoikuyae CC4533 |
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Putative Sphingobium yanoikuyae CC4533 RM systems
Ref: Mitra,M. and Stanescu,A. unpublished
REBASE ref # 35996
| Sequence length: | GenBank #: | |
| Chromosome: | 4,747,868 bp | CP115456 |
| plasmid pKN1: | 647,509 bp | CP115457 |
REBASE acronym: Sya4533
Org_num: 64389
All begin PAE53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19075 | 167 aa hypothetical protein | |||
| 19080 | M | M.Sya2ORF15045P (94% identity) | CAGNNNNNNVTTA | M.Sya4533III |
| 19085 | S | S.NpaP5ORFDP (48% identity) | CAGNNNNNNVTTA | S.Sya4533III |
| 19090 | GIY-YIG nuclease family protein | |||
| plasmid pKN1 | ||||
| 24250 | IS110 family transposase | |||
| 24255 | R | SbiO1ORF9670P (89% identity) | GGHANNNNNNNCTTC | Sya4533IP |
| 24260 | M | M.SbiO1ORF9670P (91% identity) | GGHANNNNNNNCTTC | M.Sya4533I |
| 24265 | 265 aa hypothetical protein | |||
| 24270 | GIY-YIG nuclease family protein | |||
| 24275 | S | S.AinAB2ORF7495P (36% identity) | GGHANNNNNNNCTTC | S.Sya4533I |
| 24280 | restriction system-associated AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4620 | 256 aa hypothetical protein | |||
| 4625 | M | M.SspRAC03ORF2664P (83% identity) | M.Sya4533ORF4625P | |
| 4630 | 145 aa hypothetical protein | |||
| 4685 | 188 aa hypothetical protein | |||
| 4690 | M | M.PspGA68ORF12325P (70% identity) | M.Sya4533ORF4690P | |
| 4695 | 92 aa hypothetical protein | |||
| 6630 | phage portal protein | |||
| 6635 | M | M.Scl10874ORF1027320P (71% identity) | M.Sya4533ORF6635P | |
| 6640 | 217 aa hypothetical protein | |||
| 12700 | metalloregulator ArsR/SmtB family transcription | |||
| 12705 | M | M.SyaTJORF13370P (98% identity) | GANTC | M.Sya4533II |
| 12710 | dihydropteroate synthase | |||
| 13850 | 122 aa hypothetical protein | |||
| 13855 | M | M.SyaSHJORF19635P (92% identity) | M.Sya4533ORF13855P | |
| 13860 | 67 aa hypothetical protein | |||