Citrobacter freundii NY2385 |
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Putative Citrobacter freundii NY2385 RM systems
Ref: Zhou,D. unpublished
REBASE ref # 30477
| Sequence length: | GenBank #: | |
| Chromosome: | 5,023,364 bp | CP096921 |
| plasmid pNY2385-2: | 95,438 bp | CP126882 |
| plasmid pNY2385-IMP: | 62,214 bp | CP096922 |
REBASE acronym: Cfr2385
Org_num: 64279
All begin M2J86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11455 | AAA family ATPase | |||
| 11460 | R | Csp986ORF20575P (100% identity) | Cfr2385ORF11460P | |
| 11465 | IS5-like element ISKpn26 family transposase | |||
| 14415 | type II toxin-antitoxin system RelB/DinJ family | |||
| 14420 | M | M.SenS0935ORF770P (100% identity) | ACYNNNNNNGTTC | M.Cfr2385ORF14420P |
| 14425 | S | S.EclE4ORF21960P (100% identity) | ACYNNNNNNGTTC | S.Cfr2385ORF14420P |
| 14430 | R | SenS0935ORF770P (100% identity) | ACYNNNNNNGTTC | Cfr2385ORF14420P |
| 14435 | 184 aa hypothetical protein | |||
| 18100 | IS5-like element ISKpn26 family transposase | |||
| 18105 | R | Ero309ORF20880P (100% identity) | Cfr2385ORF18115P | |
| 18110 | S | S.Ero309ORF20880P (100% identity) | S1.Cfr2385ORF18115P | |
| 18115 | M | M.Ero309ORF20880P (100% identity) | M.Cfr2385ORF18115P | |
| 18120 | S | S2.CyoCF10ORF3410P (100% identity) | S2.Cfr2385ORF18115P | |
| 18125 | GTPase family protein | |||
| 18615 | 112 aa hypothetical protein | |||
| 18620 | R | EcosAW17ORF21290P (99% identity) | Cfr2385ORF18630P | |
| 18625 | S | S.Cfr488ORF21040P (68% identity) | S.Cfr2385ORF18630P | |
| 18630 | M | M.KpnsF5ORF29200P (99% identity) | M.Cfr2385ORF18630P | |
| 18635 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 70 | phosphohydrolase | |||
| 75 | M | M.CfrZY198ORF9290P (100% identity) | CCWGG | M.Cfr2385ORF75P |
| 80 | V | V.CspS39ORF13780P (100% identity) | CCWGG | V.Cfr2385ORF75P |
| 85 | drug/metabolite exporter YedA | |||
| 6310 | 70 aa hypothetical protein | |||
| 6315 | M | M.Cfr2084ORF15855P (100% identity) | M.Cfr2385ORF6315P | |
| 6320 | DUF2732 family protein | |||
| 16285 | cell division protein DamX | |||
| 16290 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr2385DamP |
| 16295 | ribulose-phosphate 3-epimerase | |||
| 16830 | DUF2556 family protein | |||
| 16835 | M | M.Eco5172ORF4078P (100% identity) | ATGCAT | M.Cfr2385ORF16835P |
| 16840 | tyrosine-type recombinase/integrase | |||
| plasmid pNY2385-2 | ||||
| ??? | M | M.Cfr369ORF28370P (84% identity) | M.Cfr2385ORFAP | |
| plasmid pNY2385-IMP | ||||
| 23995 | EAL domain-containing protein | |||
| 24000 | R | YpsR1ORFAP (100% identity) | CCWGG | Cfr2385ORF24005P |
| 24005 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Cfr2385ORF24005P |
| 24010 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4915 | shufflon system plasmid conjugative transfer | |||
| 4920 | R | Cfr030ORF15855P (99% identity) | Cfr2385ORF4925P | |
| 4925 | M | M.Kpni101ORF1822P (99% identity) | M.Cfr2385ORF4925P | |
| 4930 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1500 | tyrosine-type recombinase/integrase | |||
| 1505 | R | Cfr2084ORF11065P (100% identity) | Cfr2385ORF1505P | |
| 1510 | DUF1643 domain-containing protein | |||