Pseudomonas aeruginosa NY8688 |
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Putative Pseudomonas aeruginosa NY8688 RM systems
Ref: Zhou,D. unpublished
REBASE ref # 30477
| Sequence length: | GenBank #: | |
| Chromosome: | 6,890,238 bp | CP096909 |
| plasmid pNY8688-IMP: | 24,897 bp | CP096910 |
REBASE acronym: Pae8688
Org_num: 64375
All begin M2J77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 400 | UvrD-helicase domain-containing protein | |||
| 405 | M | M.Psp19500ORF3125P (100% identity) | M.Pae8688ORF405P | |
| 410 | S | S.PspKK18ORFBP (100% identity) | S.Pae8688ORF405P | |
| 415 | IS5-like element IS1384 family transposase | |||
| 3020 | 362 aa hypothetical protein | |||
| 3025 | M | M.PaePA59ORF3015P (100% identity) | M.Pae8688ORF3025P | |
| 3030 | S | S.PaePA59ORF3015P (100% identity) | S.Pae8688ORF3025P | |
| 3035 | GIY-YIG nuclease family protein | |||
| 3040 | DNA binding domain-containing protein | |||
| 3045 | R | PaePA59ORF3015P (99% identity) | Pae8688ORF3025P | |
| 3050 | 275 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6765 | Arc family DNA-binding protein | |||
| 6770 | M | M.PspAK6UORFCP (100% identity) | M.Pae8688ORF6770P | |
| 6775 | nucleoid-associated protein YejK | |||
| 10270 | phosphoribosylaminoimidazolesuccinocarboxamide | |||
| 10280 | R | R2.PaeLo166ORF21190P (100% identity) | GTCGAC | R1.Pae8688ORF10290P |
| 10285 | R | PaePA59ORF23060P (100% identity) | GTCGAC | R2.Pae8688ORF10290P |
| 10290 | M | M.PaePA59ORF23060P (100% identity) | GTCGAC | M.Pae8688ORF10290P |
| 10295 | helix-turn-helix domain-containing protein | |||
| 19050 | DUF3820 family protein | |||
| 19055 | M | M.PaeZa5ORFAP (77% identity) | M1.Pae8688ORF19055P | |
| 19060 | M | M.PaeVAP2ORF14985P (95% identity) | M2.Pae8688ORF19055P | |
| 19065 | 212 aa hypothetical protein | |||
| 20075 | 83 aa hypothetical protein | |||
| 20080 | M | M.PaePA59ORF13075P (100% identity) | M.Pae8688ORF20080P | |
| 20085 | site-specific integrase | |||
| plasmid pNY8688-IMP | ||||
| 32250 | 58 aa hypothetical protein | |||
| 32255 | R | Pae92021ORF31465P (100% identity) | Pae8688ORF32260P | |
| 32260 | M | M.Pae92021ORF31465P (100% identity) | M.Pae8688ORF32260P | |
| 32265 | 70 aa hypothetical protein | |||