Citrobacter freundii 2021CK-01443 |
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Putative Citrobacter freundii 2021CK-01443 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 5,411,426 bp | CP115129 |
| plasmid unnamed1: | 117,275 bp | CP115130 |
| plasmid unnamed2: | 71,470 bp | CP115131 |
REBASE acronym: Cfr1443
Org_num: 64146
All begin O9240_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5610 | type IV toxin-antitoxin system AbiEi family | |||
| 5615 | R | CfrSK3ORF3795P (100% identity) | TTACNNNNNTAYC | Cfr1443ORF5620P |
| 5620 | M | M.Cfr13639I (100% identity) | TTACNNNNNTAYC | M.Cfr1443ORF5620P |
| 5625 | S | S.CfrSK3ORF3795P (100% identity) | TTACNNNNNTAYC | S.Cfr1443ORF5620P |
| 5630 | host cell division inhibitor Icd-like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 575 | IS3 family transposase | |||
| 580 | M | M.Ssp15303DcmP (100% identity) | CCWGG | M.Cfr1443DcmP |
| 585 | 55 aa hypothetical protein | |||
| 1280 | 284 aa hypothetical protein | |||
| 1285 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.Cfr1443ORF1285P |
| 1290 | DNA-binding protein | |||
| 1410 | 202 aa hypothetical protein | |||
| 1415 | M | M.SmapR478ORF272P (100% identity) | M.Cfr1443ORF1415P | |
| 1420 | 106 aa hypothetical protein | |||
| 3010 | cell division protein DamX | |||
| 3015 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr1443DamP |
| 3020 | ribulose-phosphate 3-epimerase | |||
| 3555 | DUF2556 family protein | |||
| 3560 | M | M.CfrSK3ORF2280P (98% identity) | ATGCAT | M.Cfr1443ORF3560P |
| 3565 | DNA-binding transcriptional regulator Fis | |||
| 4805 | holin | |||
| 4810 | M | M.KspRE03ORF22990P (97% identity) | M.Cfr1443ORF4810P | |
| 4815 | 91 aa hypothetical protein | |||
| 8430 | 59 aa hypothetical protein | |||
| 8435 | M | M.SenWT5ORF6820P (97% identity) | M.Cfr1443ORF8435P | |
| 8440 | 180 aa hypothetical protein | |||
| 10000 | conserved phage C-terminal domain-containing | |||
| 10005 | M | M2.Cfr7749CORF20P (99% identity) | M1.Cfr1443ORF10005P | |
| 10010 | M | M1.Cfr7749CORF20P (99% identity) | M2.Cfr1443ORF10005P | |
| 10015 | RusA family crossover junction | |||
| 10855 | 129 aa hypothetical protein | |||
| 10860 | M | M.Eco9067ORF1166P (98% identity) | M.Cfr1443ORF10860P | |
| 10865 | 73 aa hypothetical protein | |||
| 11940 | phosphohydrolase | |||
| 11945 | M | M.CspMGH103ORFHP (100% identity) | CCWGG | M.Cfr1443ORF11945P |
| 11950 | V | V.CspS39ORF13780P (100% identity) | CCWGG | V.Cfr1443ORF11945P |
| 11955 | drug/metabolite exporter YedA | |||
| 17730 | 112 aa hypothetical protein | |||
| 17735 | M | M.CbrSOC06ORF10925P (98% identity) | M.Cfr1443ORF17735P | |
| 17740 | 90 aa hypothetical protein | |||
| 17740 | 90 aa hypothetical protein | |||
| 17745 | M | M.Cfr680ORF17970P (95% identity) | M.Cfr1443ORF17745P | |
| 17750 | 83 aa hypothetical protein | |||
| 23310 | HNH endonuclease | |||
| 23315 | R | Cfr13639ORF4970P (98% identity) | Cfr1443ORF23315P | |
| 23320 | helix-turn-helix transcriptional regulator | |||
| 24640 | phage holin family protein | |||
| 24645 | M | M.Cfr61ORF20415P (99% identity) | M.Cfr1443ORF24645P | |
| 24650 | TrmB family transcriptional regulator | |||
| 24670 | RusA family crossover junction | |||
| 24675 | M | M1.Csp1013ORF22925P (100% identity) | M1.Cfr1443ORF24675P | |
| 24680 | M | M2.Csp1013ORF22925P (100% identity) | M2.Cfr1443ORF24675P | |
| 24685 | conserved phage C-terminal domain-containing | |||
| plasmid unnamed1 | ||||
| 27070 | 73 aa hypothetical protein | |||
| 27075 | M | M.Kpni11ayORF5166P (100% identity) | M.Cfr1443ORF27075P | |
| 27080 | SOS response-associated peptidase family | |||
| 27100 | tyrosine-type recombinase/integrase | |||
| 27105 | R | Kpn9645ORFAP (100% identity) | CCWGG | Cfr1443ORF27110P |
| 27110 | M | M.SmaBWH35ORF16650P (100% identity) | CCWGG | M.Cfr1443ORF27110P |
| 27115 | AAA family ATPase | |||
| plasmid unnamed2 | ||||
| 27560 | IS6-like element IS26 family transposase | |||
| 27565 | M | M.YpsR2ORFAP (38% identity) | M1.Cfr1443ORF27565P | |
| 27570 | IS1 family transposase | |||
| 27575 | IS6-like element IS26 family transposase | |||
| ??? | DNA-cytosine methyltransferase | |||
| 27580 | DNA (cytosine-5-)-methyltransferase | |||
| 27585 | R | Sen23701ORF24490P (100% identity) | CCWGG | Cfr1443ORF27565P |
| 27590 | IS6 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4555 | inovirus Gp2 family protein | |||
| ??? | M | M.Eco9067ORF712P (100% identity) | M.Cfr1443ORF4560P | |
| 4565 | IS3 family transposase | |||
| 5060 | IS3-like element ISSen4 family transposase | |||
| 5065 | M | M.Cfr13639III (64% identity) | M.Cfr1443ORF5065P | |
| 5070 | DUF2130 domain-containing protein | |||