Salmonella enterica 1116 |
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Putative Salmonella enterica 1116 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,682,466 bp | CP091634 |
| plasmid p1116-1: | 4,267 bp | CP091635 |
REBASE acronym: Sen1116
Org_num: 63910
All begin L5505_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | cell division protein DamX | |||
| 1810 | M | M.StyTDamP (100% identity) | GATC | M.Sen1116DamP |
| 1815 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.SspZ69ORF2350P (100% identity) | ATGCAT | M.Sen1116ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 5530 | TraR/DksA family transcriptional regulator | |||
| 5535 | M | M.Sens733ORF5515P (100% identity) | M.Sen1116ORF5535P | |
| 5540 | phosphoadenosine phosphosulfate reductase family | |||
| 9005 | phosphohydrolase | |||
| 9010 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen1116DcmP |
| 9015 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen1116DcmP |
| 9020 | drug/metabolite exporter YedA | |||
| 19045 | TnsA endonuclease N-terminal domain-containing | |||
| 19050 | R | Sens770ORF7690P (100% identity) | Sen1116ORF19050P | |
| 19055 | malate transporter | |||
| 19055 | malate transporter | |||
| 19060 | M | M.SspZ69DndBP (100% identity) | M.Sen1116DndBP | |
| 19065 | DNA phosphorothioation system sulfurtransferase | |||
| 19060 | DNA sulfur modification protein DndB | |||
| 19065 | M | M.SspZ69DndCP (100% identity) | M.Sen1116DndCP | |
| 19070 | DNA sulfur modification protein DndD | |||
| 19065 | DNA phosphorothioation system sulfurtransferase | |||
| 19070 | M | M.SspZ69DndDP (100% identity) | M.Sen1116DndDP | |
| 19075 | DNA sulfur modification protein DndE | |||
| 19070 | DNA sulfur modification protein DndD | |||
| 19075 | M | M.SspZ69DndEP (100% identity) | M.Sen1116DndEP | |
| 19080 | DUF262 domain-containing HNH endonuclease family | |||
| 19080 | DUF262 domain-containing HNH endonuclease family | |||
| 19085 | R | SspZ69DptHP (100% identity) | Sen1116DptHP | |
| 19090 | DNA phosphorothioation-dependent restriction | |||
| 19085 | DNA phosphorothioation-dependent restriction | |||
| 19090 | R | SspZ69DptGP (100% identity) | Sen1116DptGP | |
| 19095 | DNA phosphorothioation-dependent restriction | |||
| plasmid p1116-1 | ||||
| 22465 | M | M.Sens733ORF23630P (100% identity) | M.Sen1116ORF22465P | |
| 22470 | 122 aa hypothetical protein | |||
| 22475 | 49 aa hypothetical protein | |||
| 22460 | R | Sens733ORF23630P (100% identity) | Sen1116ORF22465P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16780 | small effector SsaA | |||
| 16785 | R | SspsA7ORF16840P (100% identity) | CAGAG | Sen1116ORF16790P |
| 16790 | M | M.Sens770ORF9955P (100% identity) | CAGAG | M.Sen1116ORF16790P |
| 16795 | MFS transporter | |||