Salmonella enterica SECerM2017 |
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Putative Salmonella enterica SECerM2017 RM systems
Ref: Shigemura,H. et al. unpublished
REBASE ref # 35842
Complete sequence: 4,479,959 bp
GenBank #: AP024345
REBASE acronym: Sen2017
Org_num: 63925
All begin SAML2017_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3220 | cell division protein DamX | |||
| 3230 | M | M.SenB182DamP (100% identity) | GATC | M.Sen2017DamP |
| 3240 | ribulose-phosphate 3-epimerase | |||
| 4170 | 54 aa hypothetical protein | |||
| 4180 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen2017ORF4180P |
| 4190 | DNA-binding protein Fis | |||
| 10250 | 77 aa hypothetical protein | |||
| 10260 | R | SenCer87ORF1735P (100% identity) | GCCGGC | Sen2017ORF10270P |
| 10270 | M | M.SenCer87ORF1735P (100% identity) | GCCGGC | M.Sen2017ORF10270P |
| 10280 | 529 aa hypothetical protein | |||
| 24610 | 55 aa hypothetical protein | |||
| 24620 | M | M2.SenRM074ORF7060P (100% identity) | M1.Sen2017ORF24620P | |
| 24630 | conjugal transfer protein TraR | |||
| ??? | M | M1.SenRM074ORF7060P (100% identity) | GATC | M2.Sen2017ORF24620P |
| 24650 | 80 aa hypothetical protein | |||
| 24900 | drug/metabolite exporter YedA | |||
| 24910 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen2017DcmP |
| 24920 | M | M.Sen6020DcmP (100% identity) | CCWGG | M.Sen2017DcmP |
| 24930 | phosphohydrolase | |||
| 35560 | 530 aa hypothetical protein | |||
| ??? | R | Sen7502ORF18850P (100% identity) | Sen2017ORF35570P | |
| 35590 | 142 aa hypothetical protein | |||
| 35600 | 97 aa hypothetical protein | |||
| 35610 | M | M.SenCer87DndB (100% identity) | M.Sen2017DndBP | |
| 35620 | 544 aa hypothetical protein | |||
| 35610 | 361 aa hypothetical protein | |||
| 35620 | M | M.SenCer87DndC (100% identity) | M.Sen2017DndCP | |
| 35630 | 671 aa hypothetical protein | |||
| 35620 | 544 aa hypothetical protein | |||
| 35630 | M | M.SenCer87DndD (98% identity) | M.Sen2017DndDP | |
| 35640 | 117 aa hypothetical protein | |||
| 35630 | 671 aa hypothetical protein | |||
| 35640 | M | M.SspZ69DndEP (100% identity) | M.Sen2017DndEP | |
| 35650 | 596 aa hypothetical protein | |||
| 35650 | 596 aa hypothetical protein | |||
| 35660 | R | SspZ69DptHP (100% identity) | Sen2017DptHP | |
| 35670 | 440 aa hypothetical protein | |||
| 35670 | 440 aa hypothetical protein | |||
| 35680 | R | SenCer87DptF (100% identity) | Sen2017DptFP | |
| 35690 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 31060 | cytochrome ubiquinol oxidase subunit I | |||
| 31070 | R | SenCer87IP (99% identity) | CAGAG | Sen2017ORF31080P |
| 31080 | M | M.SenS316II (100% identity) | CAGAG | M.Sen2017ORF31080P |
| 31090 | MFS transporter | |||