Pandoraea species XJJ-1 |
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Putative Pandoraea species XJJ-1 RM systems
Ref: Yuan,B. and Zhang,L. unpublished
REBASE ref # 35809
Complete sequence: 5,378,876 bp
GenBank #: CP113827
REBASE acronym: PspXJJ1
Org_num: 63850
All begin OYT13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18700 | transposase | |||
| ??? | S | S1.XorCHN01ORF2975P (36% identity) | S2.PspXJJ1ORF18730P | |
| 18710 | 3-5 exonuclease | |||
| 18715 | PD-(D/E)XK nuclease family protein | |||
| 18720 | DUF3293 domain-containing protein | |||
| 18725 | endonuclease NucS | |||
| 18730 | M | M.PspBNSORF13025P (93% identity) | M.PspXJJ1ORF18730P | |
| 18735 | S | S.AcaCH129ORF11330P (42% identity) | S1.PspXJJ1ORF18730P | |
| 18740 | restriction endonuclease | |||
| 18745 | R | PspBNSORF13025P (92% identity) | PspXJJ1ORF18730P | |
| 18750 | HNH endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8740 | tryptophan synthase subunit beta | |||
| 8745 | M | M.PspNE5ORF41730P (93% identity) | GTWWAC | M.PspXJJ1ORF8745P |
| 8750 | tryptophan synthase subunit alpha | |||
| 15990 | 120 aa hypothetical protein | |||
| 15995 | M | M.Csp24ORF35870P (82% identity) | M.PspXJJ1ORF15995P | |
| 16000 | DUF4224 domain-containing protein | |||
| 16755 | 171 aa hypothetical protein | |||
| 16760 | M | M.PspNE5ORF29640P (90% identity) | M.PspXJJ1ORF16760P | |
| 16765 | type II toxin-antitoxin system HicA family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20345 | ATP-binding protein | |||
| 20350 | R | PchT1624SspCP (100% identity) | PspXJJ1ORF20355P | |
| 20355 | M | M.SspCW117ORF8175P (100% identity) | M.PspXJJ1ORF20355P | |
| 20360 | AIPR family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7595 | phosphatase PAP2 family protein | |||
| 7600 | R | Psp92MrrP (80% identity) | PspXJJ1MrrP | |
| 7605 | FMN-binding negative transcriptional regulator | |||