Salmonella enterica subsp. enterica KNP01 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica KNP01 RM systems
Ref: Yin,Z. and Kan,N. unpublished
REBASE ref # 35843
Complete sequence: 4,756,748 bp
GenBank #: CP113364
REBASE acronym: SenKNP01
Org_num: 63934
All begin OU685_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19585 | 322 aa hypothetical protein | |||
| 19590 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | SenKNP01ORF19595P |
| 19595 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.SenKNP01ORF19595P |
| 19600 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.SenKNP01ORF19595P |
| 19605 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1725 | cell division protein DamX | |||
| 1730 | M | M.StyTDamP (100% identity) | GATC | M.SenKNP01DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenKNP01ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 5385 | zinc ribbon domain-containing protein | |||
| 5390 | M | M.SenXB08ORF5455P (100% identity) | GGTACC | M.SenKNP01ORF5390P |
| 5395 | 470 aa hypothetical protein | |||
| 6955 | 67 aa hypothetical protein | |||
| 6960 | M | M.SenXB08ORF7110P (100% identity) | M.SenKNP01ORF6960P | |
| 6965 | 175 aa hypothetical protein | |||
| 9305 | phosphohydrolase | |||
| 9310 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.SenKNP01DcmP |
| 9315 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenKNP01DcmP |
| 9320 | drug/metabolite exporter YedA | |||
| 19745 | response regulator receiver domain | |||
| 19750 | R | SenXB08ORF19940P (100% identity) | SenKNP01ORF19750P | |
| 19755 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17285 | small effector SsaA | |||
| 17290 | R | SspA292ORF17210P (100% identity) | CAGAG | SenKNP01ORF17295P |
| 17295 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.SenKNP01ORF17295P |
| 17300 | MFS transporter | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5445 | 3-5 exonuclease | |||
| 5450 | M | M.Sens24219ORF5575P (100% identity) | GATC | M.SenKNP01ORF5450P |
| 5455 | replication endonuclease | |||