Escherichia coli GN02323 |
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Putative Escherichia coli GN02323 RM systems
Ref: Bethke,J.H. et al. unpublished
REBASE ref # 35779
| Sequence length: | GenBank #: | |
| Chromosome: | 5,053,990 bp | CP095514 |
| plasmid p2323-2: | 74,109 bp | CP095517 |
REBASE acronym: Eco2323
Org_num: 63722
All begin MW403_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3830 | endoribonuclease SymE | |||
| 3835 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco2323ORF3845P |
| 3840 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco2323ORF3845P |
| 3845 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco2323ORF3845P |
| 3850 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3475 | helix-turn-helix domain-containing protein | |||
| 3480 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco2323ORF3480P |
| 3485 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco2323ORF3480P |
| 3490 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco2323ORF3480P |
| 3495 | McrC family protein | |||
| 14040 | drug/metabolite exporter YedA | |||
| 14045 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.Eco2323DcmP |
| 14050 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco2323DcmP |
| 14055 | phosphohydrolase | |||
| 21890 | DNA-binding transcriptional regulator Fis | |||
| 21895 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco2323ORF21895P |
| 21900 | DUF2556 family protein | |||
| 22490 | ribulose-phosphate 3-epimerase | |||
| 22495 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2323DamP |
| 22500 | cell division protein DamX | |||
| plasmid p2323-2 | ||||
| 25285 | 103 aa hypothetical protein | |||
| 25290 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco2323ORF25290P |
| 25295 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3490 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 3495 | R | EcosS9McrCP (100% identity) | Eco2323McrCP | |
| 3500 | R | EcosS3McrBP (100% identity) | Eco2323McrBP | |
| 3505 | glycosyltransferase | |||
| 3845 | type I restriction-modification system subunit | |||
| 3850 | R | Ecou021MrrP (100% identity) | Eco2323MrrP | |
| 3855 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9865 | recombination protein NinB | |||
| 9870 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco2323ORF9870P |
| 9875 | NinE family protein | |||