Klebsiella pneumoniae SCLC4-1 |
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Putative Klebsiella pneumoniae SCLC4-1 RM systems
Ref: Yin,Y. and Li,R. unpublished
REBASE ref # 35787
| Sequence length: | GenBank #: | |
| Chromosome: | 5,254,101 bp | CP113202 |
| plasmid pSCLC4-1_3: | 211,765 bp | CP113204 |
| plasmid pSCLC4-1_4: | 56,294 bp | CP113205 |
| plasmid pSCLC4-1_temx_288k: | 288,388 bp | CP113203 |
REBASE acronym: KpnSCLC41
Org_num: 63759
All begin OT485_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22695 | serine/threonine protein kinase | |||
| 22700 | M | M.KpnyORFBP (100% identity) | TTACNNNNNTAG | M.KpnSCLC41ORF22700P |
| 22705 | S | S.KpnyORFBP (100% identity) | TTACNNNNNTAG | S.KpnSCLC41ORF22700P |
| 22710 | R | KpnyORFBP (100% identity) | TTACNNNNNTAG | KpnSCLC41ORF22700P |
| 22715 | 580 aa hypothetical protein | |||
| plasmid pSCLC4-1_3 | ||||
| 27915 | SprT family zinc-dependent metalloprotease | |||
| 27920 | R | SmaQC11ORF51970P (100% identity) | TGGANNNNNNNTTG | KpnSCLC41ORF27935P |
| 27925 | YecA family protein | |||
| 27930 | S | S.KpnPRORFAP (100% identity) | TGGANNNNNNNTTG | S.KpnSCLC41ORF27935P |
| 27935 | M | M.KquYZ22ORF26570P (100% identity) | TGGANNNNNNNTTG | M.KpnSCLC41ORF27935P |
| 27940 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6160 | 71 aa hypothetical protein | |||
| 6165 | M | M.Kpns110ORF6220P (100% identity) | M.KpnSCLC41ORF6165P | |
| 6170 | 339 aa hypothetical protein | |||
| 8795 | phosphohydrolase | |||
| 8800 | M | M.Ksp54798DcmP (100% identity) | CCWGG | M.KpnSCLC41DcmP |
| 8805 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnSCLC41DcmP |
| 8810 | drug/metabolite exporter YedA | |||
| 16165 | 57 aa hypothetical protein | |||
| 16170 | M | M.KpnSTLE2ORF17335P (100% identity) | M.KpnSCLC41ORF16170P | |
| 16175 | 3-5 exoribonuclease | |||
| 19355 | helix-turn-helix domain-containing protein | |||
| 19360 | M | M.KpnTH07ORF19450P (100% identity) | M.KpnSCLC41ORF19360P | |
| 19365 | 73 aa hypothetical protein | |||
| 22725 | 239 aa hypothetical protein | |||
| 22730 | R | KpnyORFAP (100% identity) | GAAC | KpnSCLC41ORF22730P |
| 22735 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pSCLC4-1_4 | ||||
| 28480 | EAL domain-containing protein | |||
| 28485 | R | YpsR1ORFAP (100% identity) | CCWGG | KpnSCLC41ORF28490P |
| 28490 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.KpnSCLC41ORF28490P |
| 28495 | IS1 family transposase | |||
| plasmid pSCLC4-1_temx_288k | ||||
| 27115 | DNA replication protein DnaC | |||
| 27120 | M | M.Kqu645ORF52040P (100% identity) | CCWGG | M.KpnSCLC41ORF27120P |
| 27125 | R | Sen20597ORF9325P (100% identity) | CCWGG | KpnSCLC41ORF27120P |
| 27130 | 82 aa hypothetical protein | |||
| 27195 | 250 aa hypothetical protein | |||
| 27200 | M | M.Sen20597ORF9240P (100% identity) | M.KpnSCLC41ORF27200P | |
| 27205 | 1126 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22665 | IS3 family transposase | |||
| 22670 | R | KpnyMcrBP (98% identity) | KpnSCLC41McrB2P | |
| 22675 | R | Kpntgc02McrCP (100% identity) | KpnSCLC41McrC2P | |
| 22680 | IS3 family transposase | |||
| plasmid pSCLC4-1_3 | ||||
| 27570 | IS3-like element ISKpn38 family transposase | |||
| 27575 | R | Rte104AMcrBP (100% identity) | KpnSCLC41McrBP | |
| 27580 | R | RorCRE01McrC2P (100% identity) | KpnSCLC41McrCP | |
| 27585 | IS5 family transposase | |||