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Putative Klebsiella pneumoniae SYCC6-1 RM systems
Ref: Yin,Y. and Li,R. unpublished
REBASE ref # 35787
Sequence length: | GenBank #: | |
Chromosome: | 5,256,371 bp | CP113222 |
plasmid pSYCC6-1_3: | 211,710 bp | CP113223 |
plasmid pSYCC6-1_4: | 53,691 bp | CP113224 |
plasmid pSYCC6-1_tmex_306k: | 306,166 bp | CP113221 |
REBASE acronym: KpnSYCC61
Org_num: 63765
All begin OS910_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3565 | serine/threonine protein kinase | |||
3570 | M | M.KpnyORFBP (100% identity) | TTACNNNNNTAG | M.KpnSYCC61ORF3570P |
3575 | S | S.KpnyORFBP (100% identity) | TTACNNNNNTAG | S.KpnSYCC61ORF3570P |
3580 | R | KpnyORFBP (100% identity) | TTACNNNNNTAG | KpnSYCC61ORF3570P |
3585 | 580 aa hypothetical protein | |||
plasmid pSYCC6-1_3 | ||||
27610 | SprT family zinc-dependent metalloprotease | |||
27615 | R | SmaQC11ORF51970P (100% identity) | KpnSYCC61ORF27635P | |
27620 | YecA family protein | |||
27625 | S | S.Kqu5BL06ORF30990P (55% identity) | S2.KpnSYCC61ORF27635P | |
27630 | S | S1.KquYZ22ORF26570P (39% identity) | S1.KpnSYCC61ORF27635P | |
27635 | M | M.KquYZ22ORF26570P (100% identity) | M.KpnSYCC61ORF27635P | |
27640 | IS1 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3595 | 239 aa hypothetical protein | |||
3600 | R | KpnyORFAP (100% identity) | GAAC | KpnSYCC61ORF3600P |
3605 | integrase arm-type DNA-binding domain-containing | |||
8380 | cell division protein DamX | |||
8385 | M | M.KspC31DamP (100% identity) | GATC | M.KpnSYCC61DamP |
8390 | ribulose-phosphate 3-epimerase | |||
12750 | 71 aa hypothetical protein | |||
12755 | M | M.Kpns110ORF6220P (83% identity) | M.KpnSYCC61ORF12755P | |
12760 | 339 aa hypothetical protein | |||
15415 | phosphohydrolase | |||
15420 | M | M.KpnFF88DcmP (100% identity) | CCWGG | M.KpnSYCC61DcmP |
15425 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnSYCC61DcmP |
15430 | drug/metabolite exporter YedA | |||
22835 | 54 aa hypothetical protein | |||
22840 | M | M.Kva19ORF21490P (99% identity) | M.KpnSYCC61ORF22840P | |
22845 | 3-5 exoribonuclease | |||
26030 | helix-turn-helix domain-containing protein | |||
26035 | M | M.KpnTH07ORF19450P (100% identity) | M.KpnSYCC61ORF26035P | |
26040 | 73 aa hypothetical protein | |||
plasmid pSYCC6-1_4 | ||||
28715 | IS1 family transposase | |||
28720 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.KpnSYCC61ORF28720P |
28725 | R | YpsR1ORFAP (100% identity) | CCWGG | KpnSYCC61ORF28720P |
28730 | EAL domain-containing protein | |||
plasmid pSYCC6-1_tmex_306k | ||||
925 | 82 aa hypothetical protein | |||
930 | R | Sen20597ORF9325P (100% identity) | CCWGG | KpnSYCC61ORF935P |
935 | M | M.Kqu645ORF52040P (100% identity) | CCWGG | M.KpnSYCC61ORF935P |
940 | DNA replication protein DnaC | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3535 | IS3 family transposase | |||
3540 | R | KpnyMcrBP (98% identity) | KpnSYCC61McrB2P | |
3545 | R | Kpntgc02McrCP (100% identity) | KpnSYCC61McrC2P | |
3550 | IS3 family transposase | |||
plasmid pSYCC6-1_3 | ||||
28375 | IS3-like element ISKpn38 family transposase | |||
28380 | R | Rte104AMcrBP (100% identity) | KpnSYCC61McrBP | |
28385 | R | RorCRE01McrC2P (100% identity) | KpnSYCC61McrCP | |
28390 | IS5 family transposase |