Escherichia coli MS1718 |
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Putative Escherichia coli MS1718 RM systems
Ref: Jia,L. et al. unpublished
REBASE ref # 35727
| Sequence length: | GenBank #: | |
| Chromosome: | 5,129,604 bp | CP097716 |
| plasmid pMS1718-1: | 170,336 bp | CP097717 |
REBASE acronym: EcoMS1718
Org_num: 63562
All begin M9O77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10105 | IS3 family transposase | |||
| 10110 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoMS1718ORF10110P |
| 10115 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoMS1718ORF10110P |
| 10120 | YecA family protein | |||
| 10125 | cold shock domain-containing protein | |||
| 10130 | R | Ecoppa2ORF22455P (100% identity) | GATGNNNNNNTAC | EcoMS1718ORF10110P |
| 10135 | M48 family metallopeptidase | |||
| 20715 | adenine/cytosine-specific restriction | |||
| 20720 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoMS1718ORF20725P |
| 20725 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoMS1718ORF20725P |
| 20730 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoMS1718ORF20725P |
| 20735 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1825 | cell division protein DamX | |||
| 1830 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMS1718DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2355 | DUF2556 family protein | |||
| 2360 | M | M.Ecoppa2ORF6235P (100% identity) | ATGCAT | M.EcoMS1718ORF2360P |
| 2365 | DNA-binding transcriptional regulator Fis | |||
| 9850 | phosphohydrolase | |||
| 9855 | M | M.Ecoppa2DcmP (100% identity) | CCWGG | M.EcoMS1718DcmP |
| 9860 | V | V.Ecoppa2DcmP (100% identity) | V.EcoMS1718DcmP | |
| 9865 | drug/metabolite exporter YedA | |||
| plasmid pMS1718-1 | ||||
| 25060 | 101 aa hypothetical protein | |||
| 25065 | M | M.SflN92ORF24820P (100% identity) | M.EcoMS1718ORF25065P | |
| 25070 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20710 | GTPase | |||
| 20715 | R | Ssp28760MrrP (100% identity) | EcoMS1718MrrP | |
| 20720 | type I restriction-modification system | |||
| 20735 | endoribonuclease SymE | |||
| 20740 | R | SenHNK130McrBP (100% identity) | EcoMS1718McrBP | |
| 20745 | R | SenHNK130McrCP (100% identity) | EcoMS1718McrCP | |