Escherichia coli XYEH3934 |
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Putative Escherichia coli XYEH3934 RM systems
Ref: Wang,J. unpublished
REBASE ref # 9334
| Sequence length: | GenBank #: | |
| Chromosome: | 4,709,641 bp | CP110978 |
| plasmid pYUXYEH3934-1: | 188,533 bp | CP110979 |
REBASE acronym: Eco3934
Org_num: 63371
All begin ORI33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19370 | restriction endonuclease | |||
| 19375 | M | M.Esp9308ORFIP (79% identity) | M.Eco3934ORF19375P | |
| 19380 | IS3-like element IS3 family transposase | |||
| 19580 | endoribonuclease SymE | |||
| 19585 | R | Eco1919D3ORF20790P (99% identity) | Eco3934ORF19585P | |
| 19590 | S | S.EcoPSS12ORF22250P (68% identity) | S.Eco3934ORF19585P | |
| 19595 | IS3-like element IS3 family transposase | |||
| plasmid pYUXYEH3934-1 | ||||
| 22905 | SPFH/Band 7/PHB domain protein | |||
| 22910 | M | M.Eco5630ORF26280P (99% identity) | M.Eco3934ORF22910P | |
| 22915 | S | S.EcoLR72ORF18740P (66% identity) | S.Eco3934ORF22910P | |
| 22920 | DUF4268 domain-containing protein | |||
| 22925 | R | Efe41C20ORF22770P (100% identity) | Eco3934ORF22910P | |
| 22930 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco3934DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.Eco1919D62ORF3915P (100% identity) | ATGCAT | M.Eco3934ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 9030 | phosphohydrolase | |||
| 9035 | M | M.SspS13DcmP (99% identity) | CCWGG | M.Eco3934DcmP |
| 9040 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco3934DcmP |
| 9045 | drug/metabolite exporter YedA | |||
| 14800 | replication endonuclease | |||
| 14805 | M | M.Eco5781ORF24105P (100% identity) | M.Eco3934ORF14805P | |
| 14810 | DUF2732 family protein | |||
| plasmid pYUXYEH3934-1 | ||||
| 23030 | 290 aa hypothetical protein | |||
| 23035 | M | M.SphSSU5ORF88P (95% identity) | M.Eco3934ORF23035P | |
| 23040 | 76 aa hypothetical protein | |||
| 23370 | IS6-like element IS26 family transposase | |||
| 23375 | R | R1.Eco13353ORF62P (100% identity) | CCWGG | Eco3934ORF23380P |
| 23380 | M | M.YpsR2ORFAP (64% identity) | M.Eco3934ORF23380P | |
| 23385 | Hg(II)-responsive transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19365 | BrnT family toxin | |||
| 19370 | R | EcoPSS12MrrP (99% identity) | Eco3934MrrP | |
| 19375 | class I SAM-dependent DNA methyltransferase | |||