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Putative Rhodococcus rhodochrous GD02 RM systems
Ref: Navas,L.E. et al. Front Microbiol 12, 735000 (2021)
REBASE ref # 35610
Sequence length: | GenBank #: | |
Chromosome: | 5,587,176 bp | CP083974 |
plasmid pGD02.2.1: | 721,409 bp | CP083975 |
REBASE acronym: RrhGD02
Org_num: 63156
All begin KUM34_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1345 | acyl-CoA dehydrogenase family protein | |||
1350 | V | V.RspPD04ORF1350P (99% identity) | V.RrhGD02ORF1355P | |
1355 | M | M.RspPD04ORF1350P (100% identity) | CTCGAG | M.RrhGD02ORF1355P |
1360 | 507 aa hypothetical protein CFC35_33630 | |||
plasmid pGD02.2.1 | ||||
27995 | DUF499 domain-containing protein | |||
28000 | M | M.MspA226ORF44P (38% identity) | M.RrhGD02ORF28000BP | |
28005 | IS256 family transposase | |||
??? | M | M.San10ORF20265P (19% identity) | M.RrhGD02ORF28000AP | |
28010 | R | Rop14ORF38935P (13% identity) | RrhGD02ORF28000BP | |
28015 | IS256 family transposase | |||
28020 | R | Rop14ORF38935P (71% identity) | RrhGD02ORF28000AP | |
28025 | helix-turn-helix transcriptional regulator | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6505 | redox-regulated ATPase YchF | |||
6510 | R | RspGA1McrCP (98% identity) | RrhGD02McrCP | |
6515 | R | RspPD04McrBP (100% identity) | RrhGD02McrBP | |
6520 | arabinofuranosidase | |||
7020 | carotenoid oxygenase family protein | |||
7025 | R | RspPD04MrrP (100% identity) | RrhGD02MrrP | |
7030 | DUF1906 domain-containing protein |