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Putative Ralstonia species RS647 RM systems
Ref: She,X. and He,Z. unpublished
REBASE ref # 26087
Sequence length: | GenBank #: | |
Chromosome: | 3,847,459 bp | CP086265 |
plasmid megaplasmid: | 2,069,415 bp | CP086266 |
REBASE acronym: Rsp647
Org_num: 63151
All begin LGV81_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17390 | sensor histidine kinase N-terminal | |||
17395 | R | RsoYC40ORF50P (100% identity) | Rsp647ORF17405P | |
17400 | 284 aa hypothetical protein | |||
17405 | M | M.RsoYC40ORF50P (100% identity) | M.Rsp647ORF17405P | |
17410 | Rrf2 family transcriptional regulator | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
15 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
20 | M | M.RsoT78ORF20P (100% identity) | M.Rsp647ORF20P | |
25 | DUF87 domain-containing protein | |||
3865 | DUF6362 family protein | |||
3870 | M | M.RsoT78ORF1080P (98% identity) | M1.Rsp647ORF3870P | |
3875 | M | M1.Rso639ORF24980P (98% identity) | M2.Rsp647ORF3870P | |
3880 | NAD-glutamate dehydrogenase | |||
4010 | IS5 family transposase | |||
4015 | M | M.Rsp650ORF25870P (100% identity) | M.Rsp647ORF4015P | |
4020 | 48 aa hypothetical protein | |||
4650 | DUF6362 family protein | |||
4655 | M | M2.Rsp650ORF13700P (100% identity) | M1.Rsp647ORF4655P | |
4660 | M | M1.Rsogd2ORF2533P (100% identity) | M2.Rsp647ORF4655P | |
4665 | DUF86 domain-containing protein | |||
4780 | H-NS histone family protein | |||
4785 | M | M.Rsp650ORF13560P (100% identity) | M.Rsp647ORF4785P | |
4790 | phospholipase D family protein | |||
14930 | 156 aa hypothetical protein | |||
14935 | RM | TinORF631P (64% identity) | Rsp647ORF14935P | |
14940 | IS3 family transposase | |||
16395 | tape measure protein | |||
16400 | M | M.Rsp650ORF25870P (100% identity) | M.Rsp647ORF16400P | |
16405 | type III secretion system YopJ family effector | |||
16515 | 121 aa hypothetical protein | |||
16520 | M | M2.RsoF501ORFLP (76% identity) | M1.Rsp647ORF16520P | |
16525 | M | M2.Rsp650ORF25990P (100% identity) | M2.Rsp647ORF16520P | |
16530 | 61 aa hypothetical protein | |||
plasmid megaplasmid | ||||
23510 | IS5 family transposase | |||
23515 | M | M.Rso639ORF24670P (100% identity) | M.Rsp647ORF23515P | |
23525 | 120 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
14240 | exonuclease domain-containing protein | |||
14245 | R | BpsAW44ORF11970P (98% identity) | Rsp647ORF14250P | |
14250 | M | M.Pae3796AORF24725P (82% identity) | M.Rsp647ORF14250P | |
14255 | ATP-binding protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17510 | PLP-dependent transferase | |||
17515 | R | Rsogd2MrrP (99% identity) | Rsp647MrrP | |
17520 | 85 aa hypothetical protein |