Capnocytophaga ochracea KCOM 28121 |
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Putative Capnocytophaga ochracea KCOM 28121 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
Complete sequence: 2,807,434 bp
GenBank #: CP110230
REBASE acronym: Coc28121
Org_num: 62855
All begin OL231_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6205 | 30S ribosomal protein S12 methylthiotransferase | |||
| 6210 | M | M.Csp10638I (99% identity) | M.Coc28121ORF6210P | |
| 6215 | virulence RhuM family protein | |||
| 6220 | S | S.Coc2191ORF2575P (91% identity) | S.Coc28121ORF6210P | |
| 6225 | R | Csp10638IP (99% identity) | Coc28121ORF6210P | |
| 6230 | aminoacyl-tRNA hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6470 | DNA polymerase I | |||
| 6475 | R | Csp10638IIP (100% identity) | GAATTC | Coc28121ORF6480P |
| 6480 | M | M.Csp10638II (100% identity) | GAATTC | M.Coc28121ORF6480P |
| 6485 | class I SAM-dependent methyltransferase | |||
| 7595 | DegT/DnrJ/EryC1/StrS family aminotransferase | |||
| 7600 | M | M.Csp11097ORF1413P (96% identity) | M.Coc28121ORF7600P | |
| 7605 | R | Csp11097ORF1413P (99% identity) | Coc28121ORF7600P | |
| 7610 | glycoside hydrolase family 130 protein | |||
| 12285 | HU family DNA-binding protein | |||
| 12290 | M | M.MhiM3ORF1883P (64% identity) | M.Coc28121ORF12290P | |
| 12295 | helix-turn-helix transcriptional regulator | |||
| 12300 | R | PmeBin20ORFDP (32% identity) | Coc28121ORF12290P | |
| 12305 | translation elongation factor 4 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1080 | class I SAM-dependent methyltransferase | |||
| 1085 | R | Coc11546McrCP (98% identity) | Coc28121McrCP | |
| 1090 | R | Coc11546McrBP (98% identity) | Coc28121McrBP | |
| 1095 | winged helix-turn-helix transcriptional | |||