Capnocytophaga ochracea KCOM 26681 |
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Putative Capnocytophaga ochracea KCOM 26681 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
Complete sequence: 2,779,391 bp
GenBank #: CP110229
REBASE acronym: Coc26681
Org_num: 62854
All begin OL230_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1225 | 30S ribosomal protein S12 methylthiotransferase | |||
| 1230 | M | M.Csp323III (98% identity) | M.Coc26681ORF1230P | |
| 1235 | S | S.Csp323III (58% identity) | S.Coc26681ORF1230P | |
| 1240 | AAA family ATPase | |||
| 1245 | R | Csp10638IP (99% identity) | Coc26681ORF1230P | |
| 1250 | aminoacyl-tRNA hydrolase | |||
| 5595 | TIGR02117 family protein | |||
| 5600 | M | M.BcaHPQLIII (97% identity) | M.Coc26681ORF5600P | |
| 5605 | S | S.CspOS43ORF12455P (66% identity) | S.Coc26681ORF5600P | |
| 5610 | DUF4357 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3295 | DUF4982 domain-containing protein | |||
| 3300 | R | CocIP (99% identity) | GTYRAC | Coc26681ORF3305P |
| 3305 | M | M.CocI (98% identity) | GTYRAC | M.Coc26681ORF3305P |
| 3310 | 143 aa hypothetical protein | |||
| 7000 | AI-2E family transporter | |||
| 7005 | M | M1.CspF0512ORF1200P (96% identity) | M1.Coc26681ORF7005P | |
| 7010 | 173 aa hypothetical protein | |||
| 7015 | M | M2.CspF0512ORF1200P (93% identity) | M2.Coc26681ORF7005P | |
| 7020 | chorismate synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8305 | class I SAM-dependent methyltransferase | |||
| 8310 | R | CocMcrCP (98% identity) | Coc26681McrCP | |
| 8315 | R | Cla11458McrBP (97% identity) | Coc26681McrBP | |
| 8320 | winged helix-turn-helix transcriptional | |||