Salmonella enterica subsp. enterica serovar Typhimurium 1104-65 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium 1104-65 RM systems
Ref: Zeng,S. and Li,X. unpublished
REBASE ref # 35618
Complete sequence: 4,975,504 bp
GenBank #: CP110201
REBASE acronym: Sen110465
Org_num: 63177
All begin OCK73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20095 | restriction endonuclease | |||
| 20100 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen110465ORF20105P |
| 20105 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen110465ORF20105P |
| 20110 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen110465ORF20105P |
| 20115 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen110465DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen110465ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 5625 | IS6-like element IS26 family transposase | |||
| 5630 | M | M.StyCORF187P (49% identity) | M.Sen110465ORF5630P | |
| 5635 | thermonuclease family protein | |||
| 6215 | ead/Ea22-like family protein | |||
| 6220 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen110465ORF6220P |
| 6225 | DUF551 domain-containing protein | |||
| 9555 | IS6-like element IS26 family transposase | |||
| 9560 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sen110465ORF9565P |
| 9565 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen110465ORF9565P |
| 9570 | IS1 family transposase | |||
| 9640 | phosphohydrolase | |||
| 9645 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen110465DcmP |
| 9650 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen110465DcmP |
| 9655 | drug/metabolite exporter YedA | |||
| 20255 | BREX system P-loop protein BrxC | |||
| 20260 | RM | StyUK1IV (100% identity) | GATCAG | Sen110465ORF20260P |
| 20265 | AAA family ATPase | |||
| 22175 | LexA family transcriptional regulator | |||
| 22180 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen110465ORF22180P |
| 22185 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17790 | small effector SsaA | |||
| 17795 | R | StyUK1IP (99% identity) | CAGAG | Sen110465ORF17800P |
| 17800 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen110465ORF17800P |
| 17805 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20090 | BrnT family toxin | |||
| 20095 | R | StyUK1MrrP (100% identity) | Sen110465Mrr2P | |
| 20100 | type I restriction-modification system | |||
| 20280 | protease Lon-related BREX system protein BrxL | |||
| 20285 | R | StyLTMrrP (100% identity) | Sen110465MrrP | |
| 20290 | AAA domain-containing protein | |||