Salmonella enterica subsp. enterica serovar Typhimurium 1104-75 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium 1104-75 RM systems
Ref: Zeng,S. and Li,X. unpublished
REBASE ref # 35618
| Sequence length: | GenBank #: | |
| Chromosome: | 4,975,120 bp | CP110198 |
| plasmid pNDM-IncFII: | 77,789 bp | CP110199 |
REBASE acronym: Sen110475
Org_num: 63178
All begin OCK70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20080 | restriction endonuclease | |||
| 20085 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen110475ORF20090P |
| 20090 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen110475ORF20090P |
| 20095 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen110475ORF20090P |
| 20100 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.Sen110475DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen110475ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 5620 | IS6-like element IS26 family transposase | |||
| 5625 | M | M.StyCORF187P (49% identity) | M.Sen110475ORF5625P | |
| 5630 | thermonuclease family protein | |||
| 6210 | ead/Ea22-like family protein | |||
| 6215 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen110475ORF6215P |
| 6220 | DUF551 domain-containing protein | |||
| 9545 | IS6-like element IS26 family transposase | |||
| 9550 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sen110475ORF9555P |
| 9555 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen110475ORF9555P |
| 9560 | IS1 family transposase | |||
| 9630 | phosphohydrolase | |||
| 9635 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen110475DcmP |
| 9640 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen110475DcmP |
| 9645 | drug/metabolite exporter YedA | |||
| 20240 | BREX system P-loop protein BrxC | |||
| 20245 | RM | StyUK1IV (100% identity) | GATCAG | Sen110475ORF20245P |
| 20250 | AAA family ATPase | |||
| 22160 | LexA family transcriptional regulator | |||
| 22165 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen110475ORF22165P |
| 22170 | PerC family transcriptional regulator | |||
| plasmid pNDM-IncFII | ||||
| 24435 | 97 aa hypothetical protein | |||
| 24440 | M | M.Xca80ORFEP (100% identity) | M.Sen110475ORF24440P | |
| 24445 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17775 | small effector SsaA | |||
| 17780 | R | StyUK1IP (99% identity) | CAGAG | Sen110475ORF17785P |
| 17785 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen110475ORF17785P |
| 17790 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20075 | BrnT family toxin | |||
| 20080 | R | StyUK1MrrP (100% identity) | Sen110475Mrr2P | |
| 20085 | type I restriction-modification system | |||
| 20265 | protease Lon-related BREX system protein BrxL | |||
| 20270 | R | StyLTMrrP (100% identity) | Sen110475MrrP | |
| 20275 | AAA domain-containing protein | |||