Streptococcus suis ID35541 |
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Putative Streptococcus suis ID35541 RM systems
Ref: Kerdsin,A. et al. unpublished
REBASE ref # 35634
Complete sequence: 2,097,918 bp
GenBank #: CP109942
REBASE acronym: Ssu35541
Org_num: 63209
All begin OHM48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3325 | FAD-containing oxidoreductase | |||
| 3330 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | Ssu35541ORF3335P |
| 3335 | M | M.SsuiS10ORFCP (98% identity) | CCAANNNNNNTTC | M.Ssu35541ORF3335P |
| 3340 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.Ssu35541ORF3335P |
| 3345 | 310 aa hypothetical protein | |||
| 6850 | ribose-5-phosphate isomerase RpiA | |||
| 6855 | S | S2.SsucSS389ORF6590P (100% identity) | S2.Ssu35541ORF6865P | |
| 6860 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.Ssu35541ORF6865P |
| 6865 | M | M.SsuWTORFAP (100% identity) | M.Ssu35541ORF6865P | |
| 6870 | R | SsuiS10ORFBP (100% identity) | Ssu35541ORF6865P | |
| 6875 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4685 | 142 aa hypothetical protein | |||
| 4690 | M | M.Ssu3BORF8990P (100% identity) | M.Ssu35541ORF4690P | |
| 4695 | replication initiator protein A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3270 | DUF3885 domain-containing protein | |||
| ??? | M | M.SsuS20ORF3600P (98% identity) | M.Ssu35541ORF3280P | |
| 3285 | R | SsuiS10ORFEP (100% identity) | Ssu35541ORF3280P | |
| 3290 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4085 | 262 aa hypothetical protein | |||
| 4090 | R | SsuiS10McrBP (100% identity) | Ssu35541McrBP | |
| 4095 | R | SsucSS389McrCP (100% identity) | Ssu35541McrCP | |
| 4100 | site-specific integrase | |||