Escherichia coli O125ac:K+:H10 |
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Putative Escherichia coli O125ac:K+:H10 RM systems
Ref: Meski,S. et al. unpublished
REBASE ref # 35540
Complete sequence: 4,987,582 bp
GenBank #: CP109924
REBASE acronym: Eco04A
Org_num: 62908
All begin N8A72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6005 | IS1 family transposase | |||
| 6010 | R | Kpn1331ORFCP (100% identity) | GGANNNNNCTC | Eco04AORF6020P |
| 6015 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Eco04AORF6020P |
| 6020 | M | M.Kqu5BL06ORF28940P (100% identity) | GGANNNNNCTC | M.Eco04AORF6020P |
| 6025 | IS3-like element ISKpn34 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1855 | cell division protein DamX | |||
| 1860 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco04ADamP |
| 1865 | ribulose-phosphate 3-epimerase | |||
| 2480 | DUF2556 family protein | |||
| 2485 | M | M.EcoPO3ORF2605P (100% identity) | ATGCAT | M.Eco04AORF2485P |
| 2490 | DNA-binding transcriptional regulator Fis | |||
| 5705 | PerC family transcriptional regulator | |||
| 5710 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco04AORF5710P |
| 5715 | LexA family transcriptional regulator | |||
| 5750 | 95 aa hypothetical protein | |||
| 5755 | M | M.EcoWATORF2902P (100% identity) | M.Eco04AORF5755P | |
| 5760 | phage lysis protein EssD | |||
| 5885 | 257 aa hypothetical protein | |||
| 5890 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco04AORF5890P |
| 5895 | R | Sso8033ORF3755P (100% identity) | CCWGG | Eco04AORF5890P |
| 5900 | tetratricopeptide repeat protein | |||
| 7460 | recombination protein NinB | |||
| 7465 | M | M.EcoLR50ORF16310P (99% identity) | GATC | M.Eco04AORF7465P |
| 7470 | NinE family protein | |||
| 9885 | HD domain-containing protein | |||
| 9890 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco04ADcmP |
| 9895 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco04ADcmP |
| 9900 | drug/metabolite exporter YedA | |||
| 15895 | replication endonuclease | |||
| 15900 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.Eco04AORF15900P |
| 15905 | TraR/DksA family transcriptional regulator | |||
| 23105 | phage portal protein | |||
| 23110 | M | M.Eco15ORF23668P (97% identity) | M.Eco04AORF23110P | |
| 23115 | replication endonuclease | |||
| 23115 | replication endonuclease | |||
| 23120 | M | M.Yre11968ORF4796P (97% identity) | M1.Eco04AORF23120P | |
| 23125 | 57 aa hypothetical protein | |||
| 23130 | 68 aa hypothetical protein | |||
| 23135 | M | M.Ero695ORF8615P (86% identity) | M2.Eco04AORF23120P | |
| 23140 | 3-5 exoribonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9705 | prepilin-type N-terminal cleavage/methylation | |||
| 9710 | R | Eco7421ORF9005P (99% identity) | CCGAG | Eco04AORF9715P |
| 9715 | M | M.KpnYI2ORF1833P (100% identity) | CCGAG | M.Eco04AORF9715P |
| 9720 | SpnT protein | |||