Paenarthrobacter ureafaciens SD-1 |
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Putative Paenarthrobacter ureafaciens SD-1 RM systems
Ref: Wu,T. unpublished
REBASE ref # 26663
| Sequence length: | GenBank #: | |
| Chromosome: | 4,688,687 bp | CP101185 |
| plasmid unnamed3: | 57,612 bp | CP101188 |
| plasmid unnamed4: | 49,567 bp | CP101189 |
| plasmid unnamed5: | 42,210 bp | CP101190 |
REBASE acronym: PurSD1
Org_num: 63070
All begin NL394_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12780 | helix-turn-helix domain-containing protein | |||
| 12785 | R | PurYL1ORF12930P (100% identity) | PurSD1ORF12795P | |
| 12790 | S | S.PurSD2ORF12850P (100% identity) | S.PurSD1ORF12795P | |
| 12795 | M | M.PurYL1ORF12930P (100% identity) | M.PurSD1ORF12795P | |
| 12800 | recombinase family protein | |||
| 18055 | 262 aa hypothetical protein | |||
| 18060 | M | M.PurSD2ORF18030AP (100% identity) | M.PurSD1ORF18060AP | |
| 18065 | transposase | |||
| ??? | M | M.PurYL1ORF17845P (100% identity) | M.PurSD1ORF18060BP | |
| 18080 | S | S.PurYL1ORF17845P (100% identity) | S.PurSD1ORF18060P | |
| 18085 | R | PurYL1ORF17845P (100% identity) | PurSD1ORF18060P | |
| 18090 | 815 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15060 | DEAD/DEAH box helicase | |||
| 15065 | M | M.PurSD2ORF15040P (100% identity) | TTAA | M.PurSD1ORF15065P |
| 15070 | MarC family protein | |||
| 15315 | 123 aa hypothetical protein | |||
| 15320 | RM | PurYL1ORF15435P (100% identity) | PurSD1ORF15320P | |
| 15325 | AAA family ATPase | |||
| 18010 | 104 aa hypothetical protein | |||
| 18015 | M | M.PurYL1ORF17785P (100% identity) | M.PurSD1ORF18015P | |
| 18020 | replication-relaxation family protein | |||
| plasmid unnamed3 | ||||
| 23275 | helix-turn-helix domain-containing protein | |||
| 23280 | M | M2.PurSD2ORF22635P (100% identity) | M1.PurSD1ORF23280P | |
| 23285 | M | M1.PurSD2ORF22635P (100% identity) | M2.PurSD1ORF23280P | |
| 23290 | 266 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed4 | ||||
| 23380 | 527 aa hypothetical protein | |||
| 23385 | R | PurSD2ORF23005P (100% identity) | PurSD1ORF23390P | |
| 23390 | M | M.PurSD2ORF23005P (100% identity) | M.PurSD1ORF23390P | |
| 23395 | DUF3107 domain-containing protein | |||
| plasmid unnamed5 | ||||
| 23640 | 141 aa hypothetical protein | |||
| 23645 | R | PspR1aORF23825P (100% identity) | PurSD1ORF23650P | |
| 23650 | M | M.PspR1aORF23825P (99% identity) | M.PurSD1ORF23650P | |
| 23655 | 104 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5515 | DUF5107 domain-containing protein | |||
| 5520 | R | PurYL1McrBP (100% identity) | PurSD1McrBP | |
| 5525 | R | PurSD2McrCP (100% identity) | PurSD1McrCP | |
| 5530 | 78 aa hypothetical protein | |||
| 5845 | 90 aa hypothetical protein | |||
| 5850 | R | PurSD2ORF5905P (100% identity) | PurSD1ORF5850P | |
| 5855 | 68 aa hypothetical protein | |||