Klebsiella pneumoniae YZ-58 |
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Putative Klebsiella pneumoniae YZ-58 RM systems
Ref: Li,R. and Li,Y. unpublished
REBASE ref # 35554
| Sequence length: | GenBank #: | |
| Chromosome: | 5,294,027 bp | CP109772 |
| plasmid pYZ-58-110k: | 110,437 bp | CP109773 |
| plasmid pYZ-58-173k: | 173,418 bp | CP109774 |
REBASE acronym: KpnYZ58
Org_num: 62971
All begin M4Z05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pYZ-58-173k | ||||
| 27380 | M48 family metallopeptidase | |||
| 27385 | R | KpnR46ORF1980P (100% identity) | KpnYZ58ORF27415P | |
| 27390 | cold shock domain-containing protein | |||
| 27395 | YecA family protein | |||
| 27400 | S | S.Sma1761ORF1255P (39% identity) | S2.KpnYZ58ORF27415P | |
| 27405 | IS5 family transposase | |||
| 27410 | S | S.Sma1761ORF1255P (61% identity) | S1.KpnYZ58ORF27415P | |
| 27415 | M | M.Sma1761ORF1255P (100% identity) | M.KpnYZ58ORF27415P | |
| 27420 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2220 | cell division protein DamX | |||
| 2225 | M | M.KspC31DamP (100% identity) | GATC | M.KpnYZ58DamP |
| 2230 | ribulose-phosphate 3-epimerase | |||
| 3870 | DEAD/DEAH box helicase | |||
| 3875 | RM | SflLIN17ORF3140P (100% identity) | KpnYZ58ORF3875P | |
| 3880 | transposase | |||
| 9590 | phosphohydrolase | |||
| 9595 | M | M.KpnP0018DcmP (100% identity) | CCWGG | M.KpnYZ58DcmP |
| 9600 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.KpnYZ58DcmP |
| 9605 | drug/metabolite exporter YedA | |||
| 15635 | helix-turn-helix domain-containing protein | |||
| 15640 | M | M.Kpn3381ORFEP (95% identity) | M.KpnYZ58ORF15640P | |
| 15645 | tyrosine-type recombinase/integrase | |||
| plasmid pYZ-58-110k | ||||
| 26740 | 277 aa hypothetical protein | |||
| 26745 | M | M.KquYZ22ORF27515P (100% identity) | M.KpnYZ58ORF26745P | |
| 26750 | 75 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21010 | winged helix-turn-helix domain-containing | |||
| 21015 | R | KpnS1305ORF13390P (100% identity) | KpnYZ58ORF21015P | |
| 21020 | LuxR C-terminal-related transcriptional | |||