Escherichia coli TL-14 |
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Putative Escherichia coli TL-14 RM systems
Ref: Wang,Y. unpublished
REBASE ref # 18165
| Sequence length: | GenBank #: | |
| Chromosome: | 4,774,561 bp | CP109601 |
| plasmid p1: | 145,661 bp | CP109602 |
REBASE acronym: EcoTL14
Org_num: 62912
All begin OGV15_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 435 | IS3 family transposase | |||
| 440 | R | Eco08C20DptFP (100% identity) | EcoTL14DptFP | |
| 445 | DNA phosphorothioation-dependent restriction | |||
| 440 | DNA phosphorothioation-dependent restriction | |||
| 445 | R | Eco08C20DptGP (100% identity) | EcoTL14DptGP | |
| 450 | DNA phosphorothioation-dependent restriction | |||
| 445 | DNA phosphorothioation-dependent restriction | |||
| 450 | R | Eco08C20DptHP (99% identity) | EcoTL14DptHP | |
| 455 | DUF262 domain-containing protein | |||
| 460 | ATP-binding protein | |||
| 465 | M | M.SenS530DndEP (100% identity) | M.EcoTL14DndEP | |
| 470 | DNA sulfur modification protein DndD | |||
| 465 | DNA sulfur modification protein DndE | |||
| 470 | M | M.Eco08C20DndDP (100% identity) | M.EcoTL14DndDP | |
| 475 | DNA phosphorothioation system sulfurtransferase | |||
| 470 | DNA sulfur modification protein DndD | |||
| 475 | M | M.Eco08C20DndCP (100% identity) | M.EcoTL14DndCP | |
| 480 | DNA sulfur modification protein DndB | |||
| 475 | DNA phosphorothioation system sulfurtransferase | |||
| 480 | M | M.Eco08C20DndBP (100% identity) | M.EcoTL14DndBP | |
| 485 | DNA-binding protein | |||
| 1980 | cell division protein DamX | |||
| 1985 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTL14DamP |
| 1990 | ribulose-phosphate 3-epimerase | |||
| 2605 | DUF2556 family protein | |||
| 2610 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoTL14ORF2610P |
| 2615 | DNA-binding transcriptional regulator Fis | |||
| 8970 | phosphohydrolase | |||
| 8975 | M | M.SflN92DcmP (100% identity) | CCWGG | M.EcoTL14DcmP |
| 8980 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoTL14DcmP |
| 8985 | drug/metabolite exporter YedA | |||
| 10995 | DUF977 family protein | |||
| 11000 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoTL14ORF11000P | |
| 11005 | IS66-like element ISEc22 family transposase | |||
| 14895 | replication endonuclease | |||
| 14900 | M | M.SflN92ORF14970P (100% identity) | GATC | M.EcoTL14ORF14900P |
| 14905 | TraR/DksA family transcriptional regulator | |||
| 18045 | DUF1317 domain-containing protein | |||
| 18050 | M | M.EcoM121ORF18185P (100% identity) | M.EcoTL14ORF18050P | |
| 18055 | cell division protein ZapA | |||
| 19805 | HNH endonuclease | |||
| 19810 | R | SflSTLE4ORF19250P (99% identity) | EcoTL14ORF19810P | |
| 19815 | McrC family protein | |||
| plasmid p1 | ||||
| 23775 | 73 aa hypothetical protein | |||
| 23780 | M | M.SenS318ORF60P (100% identity) | M.EcoTL14ORF23780P | |
| 23785 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17775 | DinI family protein | |||
| 17780 | R | Ecop10BGmrSDP (100% identity) | EcoTL14GmrSDP | |
| 17785 | recombinase family protein | |||
| 19810 | HNH endonuclease | |||
| 19815 | R | SflSTLE4McrCP (100% identity) | EcoTL14McrCP | |
| 19820 | R | SflSTLE4McrBP (100% identity) | EcoTL14McrBP | |
| 19825 | DUF4942 domain-containing protein | |||