Shewanella algae VGH117 |
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Putative Shewanella algae VGH117 RM systems
Ref: Wu,Z.Y. et al. J Adv Res 18, 61-69 (2019)
REBASE ref # 35436
| Sequence length: | GenBank #: | |
| Chromosome: | 4,787,117 bp | CP032415 |
| plasmid unnamed: | 132,551 bp | CP032414 |
REBASE acronym: Sal117a
Org_num: 62498
All begin D3X10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3035 | DUF4917 family protein | |||
| 3040 | R | Sal4054ORF17520P (100% identity) | Sal117aORF3055P | |
| 3045 | 110 aa hypothetical protein | |||
| 3050 | S | S.Sal4054ORF17520P (100% identity) | S.Sal117aORF3055P | |
| 3055 | M | M.Sal4054ORF17520P (100% identity) | M.Sal117aORF3055P | |
| 3060 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15445 | aminoglycoside phosphotransferase family | |||
| 15450 | M | M.SalHIDEORF20240P (100% identity) | M.Sal117aORF15450P | |
| 15455 | 204 aa hypothetical protein | |||
| 15485 | IS5 family transposase | |||
| 15490 | V | V.Sal101ORF5500P (100% identity) | V.Sal117aORF15490P | |
| 15495 | SWIM zinc finger family protein | |||
| 20690 | 208 aa hypothetical protein | |||
| 20695 | M | M.SalA291ORF14715P (76% identity) | M.Sal117aORF20695P | |
| 20700 | DUF3319 domain-containing protein | |||
| plasmid unnamed | ||||
| 445 | 158 aa hypothetical protein | |||
| 450 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Sal117aORF450P |
| 455 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3020 | DUF3320 domain-containing protein | |||
| 3025 | R | Sal4054McrCP (100% identity) | Sal117aMcrCP | |
| 3030 | R | Sal4054McrBP (51% identity) | Sal117aMcrBP | |
| 3035 | DUF4917 family protein | |||